Gene EcolC_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0541 
Symbol 
ID6064750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp587084 
End bp587608 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content52% 
IMG OID641599948 
Productsterol-binding domain-containing protein 
Protein accessionYP_001723545 
Protein GI170018591 
COG category[I] Lipid transport and metabolism 
COG ID[COG3154] Putative lipid carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.603299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGGATA AACTGCGTTC CCGTATTGTG CATTTGGGGC CATCTCTGTT GAGTGTACCG 
GTAAAACTGA CGCCATTTGC GCTAAAACGC CAGGTTCTTG AGCAGGTCTT AAGCTGGCAA
TTCCGTCAGG CGCTGGATGA TGGCGAGCTG GAGTTTCTTG AAGGCCGCTG GTTAAGTATT
CATGTGCGTG ATATTGACCT GCAATGGTTT ACCTCGGTGG TGAATGGCAA ACTGGTGGTC
AGCCAGAACG CGCAAGCTGA TGTGAGTTTT AGTGCCGACG CCAGCGATCT GCTGATGATT
GCGGCGCGTA AACAGGATCC GGATACGCTC TTCTTCCAGC GTCGGCTGGT GATTGAAGGC
GATACGGAGC TGGGGCTGTA TGTGAAAAAC CTGATGGACG CCATTGAACT GGAGCAAATG
CCGAAAGCCT TACGCATGAT GCTGCTGCAA CTGGCGGATT TTGTTGAGGC GGGAATGAAA
ACCGCGCCTG AAACCAAACA GACATCGGTA GGTGAACCAT GCTAA
 
Protein sequence
MLDKLRSRIV HLGPSLLSVP VKLTPFALKR QVLEQVLSWQ FRQALDDGEL EFLEGRWLSI 
HVRDIDLQWF TSVVNGKLVV SQNAQADVSF SADASDLLMI AARKQDPDTL FFQRRLVIEG
DTELGLYVKN LMDAIELEQM PKALRMMLLQ LADFVEAGMK TAPETKQTSV GEPC