Gene EcolC_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0516 
Symbol 
ID6068682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp555625 
End bp556590 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content53% 
IMG OID641599921 
Producthypothetical protein 
Protein accessionYP_001723520 
Protein GI170018566 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000278585 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00919443 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCAGC AGGCAGGCAT TGGCATTCTT TTGGCGCTCA CCACAGCAAT TTGCTGGGGG 
GCGTTGCCAA TCGCAATGAA GCAGGTGCTG GAGGTGATGG AACCTCCGAC AATCGTGTTT
TACCGTTTCT TGATGGCGAG TATTGGCCTG GGTGCCATTC TTGCGGTGAA GAAGAGGTTG
CCGCCATTAC GCGTGTTTCG TAAGCCACGC TGGTTGATTT TGTTGGCAGT GGCGACCGCC
GGGCTGTTTG GGAACTTCAT CCTGTTCAGC TCATCCTTGC AATACCTGAG TCCGACCGCT
TCGCAGGTGA TTGGGCAACT CTCGCCAGTT GGCATGATGG TTGCCAGCGT ATTTATCCTG
AAAGAGAAAA TGCGCAGCAC TCAGGTTGTA GGGGCATTGA TGCTCCTGAG CGGCCTGGTG
ATGTTTTTTA ACACCAGTCT GGTCGAGATA TTTACAAAGC TCACTGATTA CACCTGGGGA
GTCATCTTTG GGGTCGGTGC GGCGACGGTT TGGGTGAGTT ATGGCGTGGC GCAAAAGGTT
TTATTGCGTC GGCTGGCCTC ACCGCAGATC CTGTTTTTGC TGTACACTTT ATGTACAATC
GCGCTCTTCC CTCTGGCAAA GCCTGGAGTG ATAGCGCAGC TTAGCCACTG GCAGCTCGCA
TGTTTAATTT TTTGCGGACT GAATACATTG GTAGGATATG GCGCCCTGGC GGAAGCGATG
GCTCGCTGGC AGGCAGCGCA GGTGAGCGCG ATCATCACGC TCACCCCACT GTTTACGCTG
TTTTTTTCAG ATCTTTTATC ACTGGCCTGG CCCGATTTCT TCGCCAGACC GATGTTAAAC
CTTTTAGGTT ATCTCGGTGC GTTTGTCGTG GTTGCGGGCG CGATGTATTC CGCCATTGGT
CATCGTATTT GGGGCGGATT ACGTAAGCAT ACAACGGTGG TATCGCAACC CCGCGCAGGC
GAATGA
 
Protein sequence
MKQQAGIGIL LALTTAICWG ALPIAMKQVL EVMEPPTIVF YRFLMASIGL GAILAVKKRL 
PPLRVFRKPR WLILLAVATA GLFGNFILFS SSLQYLSPTA SQVIGQLSPV GMMVASVFIL
KEKMRSTQVV GALMLLSGLV MFFNTSLVEI FTKLTDYTWG VIFGVGAATV WVSYGVAQKV
LLRRLASPQI LFLLYTLCTI ALFPLAKPGV IAQLSHWQLA CLIFCGLNTL VGYGALAEAM
ARWQAAQVSA IITLTPLFTL FFSDLLSLAW PDFFARPMLN LLGYLGAFVV VAGAMYSAIG
HRIWGGLRKH TTVVSQPRAG E