Gene EcolC_0497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0497 
Symbol 
ID6068600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp541899 
End bp542186 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content45% 
IMG OID641599902 
Productputative sigma(54) modulation protein 
Protein accessionYP_001723501 
Protein GI170018547 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.102256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.250547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTCA ACATTACCGG AAATAACGTC GAGATCACCG AGGCACTGCG CGAATTTGTT 
ACAGCCAAAT TTGCCAAACT TGAGCAATAT TTTGACCGAA TCAACCAGGT CTATGTTGTT
CTGAAAGTGG AGAAAGTCAC CCACACCTCT GATGCAACAC TGCATGTAAA CGGTGGTGAA
ATTCATGCCA GCGCGGAAGG TCAGGACATG TACGCTGCCA TTGATGGCTT AATTGATAAG
CTGGCACGCC AGTTGACCAA ACATAAAGAT AAACTGAAAC AACACTAA
 
Protein sequence
MQLNITGNNV EITEALREFV TAKFAKLEQY FDRINQVYVV LKVEKVTHTS DATLHVNGGE 
IHASAEGQDM YAAIDGLIDK LARQLTKHKD KLKQH