| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0479 |
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| Symbol | |
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| ID | 6068481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 519461 |
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| End bp | 520828 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641599884 |
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| Product | putative cryptic C4-dicarboxylate transporter DcuD |
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| Protein accession | YP_001723483 |
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| Protein GI | 170018529 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3069] C4-dicarboxylate transporter |
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| TIGRFAM ID | [TIGR00771] c4-dicarboxylate anaerobic carrier family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00235153 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.454228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGCA TAATTATATC TGTCATCGTA TTAATTACGA TGGGCTATTT GATCCTGAAA
AACTACAAAC CTCAGGTGGT GCTGGCTGCC GCAGGTATCT TCCTGATGAT GTGCGGTGTC
TGGTTAGGGT TCGGTGGTGT ACTCGATCCC ACCAAAAGCA GCGGCTACTT GATCGTCGAT
ATTTATAATG AAATCCTGCG CATGCTGTCC AACCGCATTG CCGGATTGGG GCTGTCGATT
ATGGCGGTGG GCGGTTATGC CCGCTACATG GAGCGCATAG GGGCCAGTCG CGCGATGGTG
AGCTTGTTAA GCCGCCCGTT AAAACTCATT CGCTCGCCGT ATATTATTCT GTCGGCAACT
TACGTCATCG GCCAAATCAT GGCGCAGTTT ATTACCAGCG CCTCCGGTCT GGGTATGTTG
CTGATGGTCA CCTTATTTCC GACGCTGGTG AGTCTGGGAG TAAGTCGCCT CTCTGCGGTG
GCGGTTATCG CAACCACAAT GTCCATTGAG TGGGGAATTC TGGAAACGAA CTCCATTTTT
GCTGCCCAGG TAGCGGGAAT GAAAATTGCC ACATACTTCT TCCACTACCA GCTTCCGGTC
GCCTCTTGCG TCATTATCTC GGTGGCGATC TCCCACTTTT TCGTGCAACG CGCTTTTGAC
AAAAAAGATA AAAATATCAA TCACGAACAG GCAGAGCAAA AAGCTCTCGA TAATGTCCCG
CCGCTCTATT ACGCCATTTT ACCTGTGATG CCGTTAATCC TGATGCTCGG CTCGCTGTTC
CTCGCCCACG TCGGGCTGAT GCAGTCAGAA CTGCATCTGG TGGTGGTGAT GTTACTGAGT
TTGACGGTGA CGATGTTTGT TGAGTTCTTC CGCAAGCATA ACTTGCGCGA AACAATGGAC
GATGTGCAGG CGTTTTTTGA CGGCATGGGT ACGCAGTTTG CCAACGTGGT AACGCTGGTG
GTCGCGGGTG AAATATTTGC GAAAGGCTTA ACGACGATTG GCACTGTCGA TGCGGTTATC
AGGGGTGCGG AGCATTCTGG TCTGGGCGGT ATTGGCGTGA TGATTATTAT GGCGCTGGTC
ATTGCCATTT GTGCCATTGT GATGGGCTCT GGCAATGCGC CGTTTATGTC ATTTGCCAGT
CTTATTCCGA ATATCGCAGC CGGACTACAT GTACCAGCGG TTGTAATGAT TATGCCGATG
CATTTTGCCA CGACGCTAGC GCGCGCGGTT TCGCCGATTA CTGCGGTGGT GGTCGTTACG
TCAGGAATTG CAGGCGTTTC GCCTTTTGCG GTGGTGAAGC GAACAGCGAT CCCCATGGCA
GTCGGTTTCG TGGTGAATAT GATTGCCACA ATCACGCTAT TTTATTAA
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| Protein sequence | MFGIIISVIV LITMGYLILK NYKPQVVLAA AGIFLMMCGV WLGFGGVLDP TKSSGYLIVD
IYNEILRMLS NRIAGLGLSI MAVGGYARYM ERIGASRAMV SLLSRPLKLI RSPYIILSAT
YVIGQIMAQF ITSASGLGML LMVTLFPTLV SLGVSRLSAV AVIATTMSIE WGILETNSIF
AAQVAGMKIA TYFFHYQLPV ASCVIISVAI SHFFVQRAFD KKDKNINHEQ AEQKALDNVP
PLYYAILPVM PLILMLGSLF LAHVGLMQSE LHLVVVMLLS LTVTMFVEFF RKHNLRETMD
DVQAFFDGMG TQFANVVTLV VAGEIFAKGL TTIGTVDAVI RGAEHSGLGG IGVMIIMALV
IAICAIVMGS GNAPFMSFAS LIPNIAAGLH VPAVVMIMPM HFATTLARAV SPITAVVVVT
SGIAGVSPFA VVKRTAIPMA VGFVVNMIAT ITLFY
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