Gene EcolC_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0424 
SymboltrkA 
ID6067682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp457036 
End bp458412 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content50% 
IMG OID641599823 
Productpotassium transporter peripheral membrane component 
Protein accessionYP_001723429 
Protein GI170018475 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000421391 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATTA TCATTCTGGG TGCCGGCCAG GTTGGCGGCA CACTGGCGGA AAACCTGGTT 
GGCGAGAACA ACGATATTAC TGTTGTCGAT ACCAACGGTG AGCGTCTGCG GACCTTACAG
GATAAATTTG ACCTGCGGGT CGTGCAGGGG CATGGCTCTC ATCCACGCGT ATTGCGGGAG
GCAGGTGCCG ACGACGCCGA TATGCTGGTT GCTGTAACCA GTTCAGATGA AACCAATATG
GTTGCCTGCC AGGTAGCCTA CTCACTTTTC AACACCCCTA ATCGCATCGC TCGTATCCGC
TCACCAGACT ACGTGCGCGA TGCCGATAAG CTATTTCATT CAGATGCTGT GCCGATTGAT
CATCTGATCG CACCAGAGCA GTTGGTTATC GATAATATTT ACCGACTGAT TGAGTATCCC
GGCGCATTGC AGGTGGTGAA CTTCGCTGAG GGTAAAGTCA GCCTGGCTGT GGTTAAAGCC
TATTATGGCG GCCCGCTGAT TGGTAATGCA CTTTCGACCA TGCGCGAACA TATGCCACAT
ATCGATACTC GTGTGGCAGC AATTTTCCGC CACGATCGCC CCATTCGTCC GCAAGGTTCG
ACCATTGTTG AAGCTGGTGA TGAAGTGTTC TTTATTGCCG CTTCACAGCA TATCCGCGCG
GTGATGAGTG AATTACAGCG ACTGGAAAAA CCGTATAAGC GGATCATGCT GGTTGGTGGC
GGTAATATCG GTGCAGGGCT GGCGCGTCGT CTGGAAAAAG ATTACAGCGT TAAACTCATC
GAACGTAATC AGCAGCGCGC TGCCGAACTG GCGGAAAAGT TACAGAATAC GATCGTCTTT
TTTGGTGATG CGTCGGATCA AGAACTACTG GCCGAAGAAC ATATCGATCA AGTTGATCTG
TTTATTGCCG TCACCAACGA TGACGAGGCC AATATCATGT CCGCCATGCT TGCCAAACGT
ATGGGTGCGA AAAAGGTGAT GGTATTGATC CAGCGTCGCG CTTATGTGGA TCTGGTTCAG
GGGAGCGTTA TCGATATTGC GATTTCACCA CAACAAGCAA CTATTTCTGC GTTGCTTAGC
CATGTGCGAA AAGCAGATAT TGTTGGTGTT TCCTCATTGC GCCGCGGCGT AGCAGAAGCT
ATTGAAGCCG TTGCTCACGG TGATGAAAGC ACCTCACGCG TTGTCGGCAG AGTCATTGAC
GAAATCAAGC TACCGCCAGG AACGATTATT GGAGCGGTGG TACGTGGAAA CGACGTGATG
ATTGCCAATG ACAATCTGCG CATTGAGCAA GGCGATCACG TAATTATGTT CCTCACAGAT
AAAAAGTTTA TTACCGACGT CGAAAGACTC TTCCAGCCAA GCCCTTTCTT CTTGTAA
 
Protein sequence
MKIIILGAGQ VGGTLAENLV GENNDITVVD TNGERLRTLQ DKFDLRVVQG HGSHPRVLRE 
AGADDADMLV AVTSSDETNM VACQVAYSLF NTPNRIARIR SPDYVRDADK LFHSDAVPID
HLIAPEQLVI DNIYRLIEYP GALQVVNFAE GKVSLAVVKA YYGGPLIGNA LSTMREHMPH
IDTRVAAIFR HDRPIRPQGS TIVEAGDEVF FIAASQHIRA VMSELQRLEK PYKRIMLVGG
GNIGAGLARR LEKDYSVKLI ERNQQRAAEL AEKLQNTIVF FGDASDQELL AEEHIDQVDL
FIAVTNDDEA NIMSAMLAKR MGAKKVMVLI QRRAYVDLVQ GSVIDIAISP QQATISALLS
HVRKADIVGV SSLRRGVAEA IEAVAHGDES TSRVVGRVID EIKLPPGTII GAVVRGNDVM
IANDNLRIEQ GDHVIMFLTD KKFITDVERL FQPSPFFL