| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0404 |
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| Symbol | rplX |
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| ID | 6067186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 447163 |
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| End bp | 447477 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641599803 |
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| Product | 50S ribosomal protein L24 |
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| Protein accession | YP_001723409 |
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| Protein GI | 170018455 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0198] Ribosomal protein L24 |
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| TIGRFAM ID | [TIGR01079] ribosomal protein L24, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000839278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000141467 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCAGCGA AAATCCGTCG TGATGACGAA GTTATCGTGT TAACCGGTAA AGATAAAGGT
AAACGCGGTA AAGTTAAGAA TGTCCTGTCT TCCGGCAAGG TCATTGTTGA AGGTATCAAC
CTGGTTAAGA AACATCAGAA GCCGGTTCCG GCCCTGAACC AACCGGGTGG CATCGTTGAA
AAAGAAGCCG CTATTCAGGT TTCCAACGTA GCAATCTTCA ATGCGGCAAC CGGCAAGGCT
GACCGTGTAG GCTTTAGATT CGAAGACGGT AAAAAAGTCC GTTTCTTCAA GTCTAACAGC
GAAACTATCA AGTAA
|
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| Protein sequence | MAAKIRRDDE VIVLTGKDKG KRGKVKNVLS SGKVIVEGIN LVKKHQKPVP ALNQPGGIVE
KEAAIQVSNV AIFNAATGKA DRVGFRFEDG KKVRFFKSNS ETIK
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