| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0347 |
|---|
| Symbol | |
|---|
| ID | 6065965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 398376 |
|---|
| End bp | 400919 |
|---|
| Gene Length | 2544 bp |
|---|
| Protein Length | 847 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641599746 |
|---|
| Product | nitrite reductase (NAD(P)H), large subunit |
|---|
| Protein accession | YP_001723352 |
|---|
| Protein GI | 170018398 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase |
|---|
| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAG TCAGACTCGC AATTATCGGT AACGGTATGG TCGGCCATCG CTTTATCGAA
GATCTTCTTG ATAAATCTGA TGCGGCCAAC TTTGATATTA CCGTTTTCTG TGAAGAACCG
CGCATCGCTT ATGACCGCGT ACACCTCTCG TCTTACTTCT CTCACCACAC CGCCGAAGAG
CTGTCGCTGG TGCGCGAAGG CTTCTACGAG AAACACGGCA TCAAAGTTCT GGTCGGCGAA
CGCGCTATCA CCATCAACCG TCAGGAGAAG GTGATTCACT CCAGCGCCGG ACGTACCGTT
TTTTATGACA AGCTGATCAT GGCAACCGGT TCCTACCCGT GGATCCCACC AATCAAAGGT
TCTGATACTC AGGACTGCTT TGTCTATCGC ACCATTGAAG ACCTCAACGC CATTGAATCC
TGCGCCCGTC GCAGCAAACG CGGTGCCGTT GTTGGTGGCG GCCTGTTAGG TCTGGAAGCC
GCTGGCGCGC TGAAAAACTT AGGTATTGAA ACCCACGTTA TCGAATTTGC CCCTATGCTG
ATGGCGGAAC AGCTTGATCA GATGGGTGGC GAGCAGCTGC GTCGCAAAAT CGAAAGTATG
GGCGTGCGCG TTCACACCAG CAAAAACACC CTTGAGATTG TGCAGGAAGG TGTCGAAGCG
CGTAAAACCA TGCGTTTTGC CGACGGCAGC GAACTGGAAG TCGACTTTAT CGTCTTCTCT
ACCGGTATCC GTCCGCGCGA TAAGCTGGCA ACCCAGTGTG GTCTGGACGT TGCTCCGCGT
GGGGGTATTG TCATTAATGA TTCCTGCCAG ACTTCCGATC CGGATATCTA CGCCATCGGT
GAATGCGCAA GCTGGAACAA CCGTGTATTT GGTCTGGTAG CACCAGGCTA CAAAATGGCG
CAGGTCGCCG TTGACCATAT TCTCGGTAGC GAAAACGCCT TTGAAGGTGC TGACCTTAGC
GCCAAGCTGA AACTGCTGGG CGTAGACGTA GGCGGTATTG GTGATGCGCA CGGTCGCACG
CCTGGCGCAC GTAGCTACGT TTACCTCGAC GAAAGCAAAG AGATCTACAA ACGCCTGATT
GTCAGCGAAG ACAACAAAAC CCTGCTCGGT GCGGTACTGG TGGGCGATAC CAGCGACTAC
GGCAACCTGC TGCAACTGGT GCTGAATGCT ATCGAGCTGC CGGAAAACCC GGATTCTCTG
ATTCTGCCGG CGCACTCGGG TAGCGGTAAG CCGTCTATCG GTGTTGATAA ACTGCCGGAC
AGCGCGCAAA TCTGCTCCTG CTTCGACGTC ACCAAAGGTG ATCTGATTGC TGCCATCAAC
AAAGGCTGCC ACACAGTTGC GGCGCTGAAA GCTGAAACCA AAGCGGGTAC TGGCTGCGGT
GGCTGTATCC CGCTGGTCAC TCAGGTACTG AACGCGGAAC TGGCGAAACA GGGCATCGAA
GTTAACAACA ACCTGTGCGA ACACTTTGCT TATTCGCGTC AGGAACTGTT CCATTTGATC
CGCGTTGAAG GCATTAAAAC CTTCGAAGAA CTGCTGGCGA AACACGGCAA AGGCTACGGT
TGTGAAGTTT GTAAACCAAC CGTCGGTTCG CTGCTGGCCT CCTGCTGGAA CGAATACATT
CTGAAGCCGG AACATACTCC GCTGCAGGAT TCTAACGACA ACTTCCTCGC TAACATCCAG
AAAGACGGCA CCTACTCGGT GATCCCGCGT TCTCCGGGCG GTGAAATCAC CCCGGAAGGG
CTGATGGCAG TGGGTCGTAT CGCGCGTGAA TTTAATCTCT ACACCAAAAT CACCGGCTCC
CAGCGCCTGG CGATGTTTGG CGCACAGAAA GACGATCTGC CGGAAATCTG GCGTCAGCTG
ATTGAAGCTG GCTTCGAAAC CGGTCATGCC TATGCGAAAG CACTGCGTAT GGCGAAAACC
TGCGTGGGTA GCACCTGGTG CCGCTACGGT GTTGGCGATA GCGTCGGCCT CGGCGTGGAA
CTGGAAAACC GCTACAAAGG CATCCGTACG CCGCACAAAA TGAAGTTCGG TGTCTCCGGC
TGTACCCGTG AATGTTCAGA AGCTCAGGGT AAAGACGTGG GTATTATCGC CACTGAAAAA
GGCTGGAACC TGTATGTTTG CGGCAACGGC GGCATGAAAC CGCGTCATGC GGATCTGCTG
GCGGCGGATA TCGATCGCGA AACGCTGATC AAATATCTCG ACCGCTTCAT GATGTTCTAC
ATCCGTACCG CCGACAAACT GACGCGTACC GCGCCGTGGT TAGAAAACCT CGAAGGCGGC
ATCGATTACC TGAAAGCGGT GATCATTGAC GACAAACTGG GGCTGAACGC TCATCTGGAA
GAAGAGATGG CGCGCCTGCG TGAAGCGGTA GTGTGTGAGT GGACTGAAAC GGTCAATACA
CCGTCCGCGC AGACTCGCTT CAAACACTTC ATCAACAGCG ACAAGCGTGA CCCGAACGTG
CAGATGGTGC CAGAGCGCGA ACAGCACCGT CCGGCAACGC CGTATGAACG TATCCCGGTA
ACTCTGGTGG AGGACAACGC ATGA
|
|---|
| Protein sequence | MSKVRLAIIG NGMVGHRFIE DLLDKSDAAN FDITVFCEEP RIAYDRVHLS SYFSHHTAEE
LSLVREGFYE KHGIKVLVGE RAITINRQEK VIHSSAGRTV FYDKLIMATG SYPWIPPIKG
SDTQDCFVYR TIEDLNAIES CARRSKRGAV VGGGLLGLEA AGALKNLGIE THVIEFAPML
MAEQLDQMGG EQLRRKIESM GVRVHTSKNT LEIVQEGVEA RKTMRFADGS ELEVDFIVFS
TGIRPRDKLA TQCGLDVAPR GGIVINDSCQ TSDPDIYAIG ECASWNNRVF GLVAPGYKMA
QVAVDHILGS ENAFEGADLS AKLKLLGVDV GGIGDAHGRT PGARSYVYLD ESKEIYKRLI
VSEDNKTLLG AVLVGDTSDY GNLLQLVLNA IELPENPDSL ILPAHSGSGK PSIGVDKLPD
SAQICSCFDV TKGDLIAAIN KGCHTVAALK AETKAGTGCG GCIPLVTQVL NAELAKQGIE
VNNNLCEHFA YSRQELFHLI RVEGIKTFEE LLAKHGKGYG CEVCKPTVGS LLASCWNEYI
LKPEHTPLQD SNDNFLANIQ KDGTYSVIPR SPGGEITPEG LMAVGRIARE FNLYTKITGS
QRLAMFGAQK DDLPEIWRQL IEAGFETGHA YAKALRMAKT CVGSTWCRYG VGDSVGLGVE
LENRYKGIRT PHKMKFGVSG CTRECSEAQG KDVGIIATEK GWNLYVCGNG GMKPRHADLL
AADIDRETLI KYLDRFMMFY IRTADKLTRT APWLENLEGG IDYLKAVIID DKLGLNAHLE
EEMARLREAV VCEWTETVNT PSAQTRFKHF INSDKRDPNV QMVPEREQHR PATPYERIPV
TLVEDNA
|
|---|
| |