Gene EcolC_0323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0323 
SymbolaroK 
ID6065347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp375865 
End bp376386 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content49% 
IMG OID641599722 
Productshikimate kinase I 
Protein accessionYP_001723328 
Protein GI170018374 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000129228 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.10404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGA AACGCAATAT CTTTCTGGTT GGGCCTATGG GTGCCGGAAA AAGCACTATT 
GGGCGCCAGT TAGCTCAACA ACTCAATATG GAATTTTACG ATTCCGATCA AGAGATTGAG
AAACGAACCG GAGCTGATGT GGGCTGGGTT TTCGATTTAG AAGGCGAAGA AGGCTTCCGC
GATCGCGAAG AAAAGGTCAT CAATGAGTTG ACCGAGAAAC AGGGTATTGT GCTGGCTACT
GGCGGCGGCT CTGTGAAATC CCGTGAAACG CGTAACCGTC TTTCCGCTCG TGGCGTTGTC
GTTTATCTTG AAACGACCAT CGAAAAGCAA CTTGCACGCA CGCAGCGTGA TAAAAAACGC
CCGTTGCTGC ACGTTGAAAC ACCGCCACGT GAAGTTCTGG AAGCGTTGGC CAATGAACGC
AATCCGCTGT ATGAAGAGAT TGCCGACGTG ACCATTCGTA CTGATGATCA AAGCGCTAAA
GTGGTCGCTA ACCAGATTAT TCACATGCTG GAAAGCAACT AA
 
Protein sequence
MAEKRNIFLV GPMGAGKSTI GRQLAQQLNM EFYDSDQEIE KRTGADVGWV FDLEGEEGFR 
DREEKVINEL TEKQGIVLAT GGGSVKSRET RNRLSARGVV VYLETTIEKQ LARTQRDKKR
PLLHVETPPR EVLEALANER NPLYEEIADV TIRTDDQSAK VVANQIIHML ESN