Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0280 |
Symbol | |
ID | 6065656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 318656 |
End bp | 320842 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641599679 |
Product | glycogen branching enzyme |
Protein accession | YP_001723285 |
Protein GI | 170018331 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.388281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATC GTATCGATAG AGACGTGATT AACGCGCTAA TTGCAGGCCA TTTTGCGGAT CCTTTTTCCG TACTGGGAAT GCATAAAACC ACCGCGGGAC TGGAAGTCCG TGCCCTTTTA CCCGACGCTA CCGATGTGTG GGTGATTGAA CCGAAAACCG GGCGCAAACT CGCAAAACTG GAGTGTCTCG ACTCACGGGG ATTCTTTAGC GGCGTCATTC CGCGACGTAA GAATTTTTTC CGCTATCAGT TGGCTGTTGT CTGGCATGGT CAGCAAAACC TGATTGATGA TCCTTACCGT TTTGGTCCGC TAATCCAGGA AATGGATGCC TGGCTATTAT CTGAAGGTAC TCACCTGCGC CCGTATGAAA CCTTAGGCGC GCATGCAGAT ACTATGGATG GCGTCACAGG TACGCGTTTC TCTGTCTGGG CTCCAAACGC CCGTCGGGTC TCGGTGGTTG GGCAATTCAA CTACTGGGAC GGTCGCCGTC ACCCGATGCG CCTGCGTAAA GAGAGCGGCA TCTGGGAACT GTTTATCCCT GGGGCGCATA ACGGTCAGCT CTATAAATAC GAGATGATTG ATGCCAATGG CAACTTGCGT CTGAAGTCCG ACCCTTATGC CTTCGAAGCG CAAATGCGCC CGGAAACCGC GTCTCTTATT TGCGGGCTGC CGGAAAAGGT TGTACAGACT GAAGAGCGCA AAAAAGCGAA TCAGTTTGAT GCGCCAATCT CTATTTATGA AGTTCACCTG GGTTCCTGGC GTCGCCACAC CGACAACAAT TTCTGGTTGA GCTACCGCGA GCTGGCCGAT CAACTGGTGC CTTATGCTAA ATGGATGGGC TTTACCCACC TCGAACTACT GCCCATTAAC GAGCATCCCT TCGATGGCAG TTGGGGTTAT CAGCCAACCG GCCTGTATGC ACCAACCCGC CGTTTTGGTA CTCGCGACGA CTTCCGTTAT TTCATTGATG CCGCACACGC AGCTGGTCTG AACGTGATTC TCGACTGGGT GCCAGGCCAC TTCCCGACTG ATGACTTTGC GCTTGCCGAA TTTGATGGCA CGAACTTGTA TGAACACAGC GATCCGCGTG AAGGCTATCA TCAGGACTGG AACACGCTGA TCTACAACTA TGGTCGCCGT GAAGTCAGTA ACTTCCTCGT CGGTAACGCG CTTTACTGGA TTGAACGTTT TGGTATTGAT GCGCTGCGCG TCGATGCGGT GGCGTCAATG ATTTATCGCG ACTACAGCCG TAAAGAGGGG GAGTGGATCC CGAACGAATT TGGCGGGCGC GAGAATCTTG AAGCGATTGA ATTCTTGCGT AATACCAACC GTATTCTTGG TGAGCAGGTT TCCGGTGCGG TGACAATGGC TGAGGAGTCT ACCGATTTCC CTGGCGTTTC TCGTCCGCAG GATATGGGCG GTCTGGGCTT CTGGTACAAG TGGAACCTCG GCTGGATGCA TGACACCCTG GACTACATGA AGCTCGACCC GGTTTATCGT CAGTATCATC ACGATAAACT GACCTTCGGG ATTCTCTACA ACTACACTGA AAACTTCGTC CTGCCGTTGT CGCATGATGA AGTGGTCCAC GGTAAAAAAT CGATTCTCGA CCGCATGCCG GGCGACGCAT GGCAGAAATT CGCGAACCTG CGCGCCTACT ATGGCTGGAT GTGGGCATTC CCGGGCAAGA AACTACTGTT CATGGGTAAC GAATTTGCCC AGGGCCGCGA GTGGAACCAT GACGCCAGCC TCGACTGGCA TCTGTTGGAA GGCGGCGATA ACTGGCACCA CGGTGTCCAG CGTCTGGTGC GCGATCTGAA CCTCACCTAC CGCCACCATA AAGCAATGCA TGAACTGGAT TTTGACCCGT ACGGCTTTGA ATGGCTGGTG GTGGATGACA AAGAACGCTC GGTGCTGATC TTTGTGCGTC GCGATAAAGA GGGTAACGAA ATCATCGTTG CCAGTAACTT TACGCCGGTA CCGCGTCATG ATTATCGCTT CGGCATTAAT CAGCCGGGCA AATGGCGTGA AATCCTCAAT ACCGATTCCA TGCACTATCA CGGCAGTAAT GCAGGCAATG GCGGCACGGT ACACAGCGAT GAGATTGCCA GCCACGGTCG TCAGCATTCA CTAAGCCTGA CGCTACCACC GCTGGCCACT ATCTGGCTGG TTCGGGAGGC AGAATGA
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Protein sequence | MSDRIDRDVI NALIAGHFAD PFSVLGMHKT TAGLEVRALL PDATDVWVIE PKTGRKLAKL ECLDSRGFFS GVIPRRKNFF RYQLAVVWHG QQNLIDDPYR FGPLIQEMDA WLLSEGTHLR PYETLGAHAD TMDGVTGTRF SVWAPNARRV SVVGQFNYWD GRRHPMRLRK ESGIWELFIP GAHNGQLYKY EMIDANGNLR LKSDPYAFEA QMRPETASLI CGLPEKVVQT EERKKANQFD APISIYEVHL GSWRRHTDNN FWLSYRELAD QLVPYAKWMG FTHLELLPIN EHPFDGSWGY QPTGLYAPTR RFGTRDDFRY FIDAAHAAGL NVILDWVPGH FPTDDFALAE FDGTNLYEHS DPREGYHQDW NTLIYNYGRR EVSNFLVGNA LYWIERFGID ALRVDAVASM IYRDYSRKEG EWIPNEFGGR ENLEAIEFLR NTNRILGEQV SGAVTMAEES TDFPGVSRPQ DMGGLGFWYK WNLGWMHDTL DYMKLDPVYR QYHHDKLTFG ILYNYTENFV LPLSHDEVVH GKKSILDRMP GDAWQKFANL RAYYGWMWAF PGKKLLFMGN EFAQGREWNH DASLDWHLLE GGDNWHHGVQ RLVRDLNLTY RHHKAMHELD FDPYGFEWLV VDDKERSVLI FVRRDKEGNE IIVASNFTPV PRHDYRFGIN QPGKWREILN TDSMHYHGSN AGNGGTVHSD EIASHGRQHS LSLTLPPLAT IWLVREAE
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