Gene EcolC_0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0279 
Symbol 
ID6065307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand+ 
Start bp317280 
End bp318383 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content54% 
IMG OID641599678 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001723284 
Protein GI170018330 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATG TTGGTTTTAT CGGCTGGCGC GGTATGGTCG GCTCCGTTCT CATGCAACGC 
ATGGTTGAAG AGCGCGACTT CGACGCCATT CGCCCTGTCT TCTTTTCTAC TTCTCAGCTT 
GGCCAGGCTG CGCCGTCTTT TGGCGGAACC ACTGGCACAC TTCAGGATGC CTTTGATCTG 
GAGGCGCTAA AGGCCCTCGA TATCATTGTG ACCTGTCAGG GCGGCGATTA TACCAACGAA 
ATCTATCCAA AGCTTCGTGA AAGCGGATGG CAAGGTTACT GGATTGACGC AGCATCGTCT 
CTGCGCATGA AAGATGACGC CATCATCATT CTTGACCCCG TCAATCAGGA CGTCATTACC 
GACGGATTAA ATAATGGCAT CAGGACTTTT GTTGGCGGTA ACTGTACCGT AAGCCTGATG 
TTGATGTCGT TGGGTGGTTT ATTCGCCAAT GATCTTGTTG ATTGGGTGTC CGTTGCAACC 
TACCAGGCCG CTTCCGGCGG TGGTGCGCGA CATATGCGTG AGTTATTAAC CCAGATGGGC 
CATCTGTATG GCCATGTGGC AGATGAACTC GCGACCCCGT CCTCTGCTAT TCTCGATATC 
GAACGCAAAG TCACAACCTT AACCCGTAGC GGTGAGCTGC CGGTGGATAA CTTTGGCGTG 
CCGCTGGCGG GTAGCCTGAT TCCGTGGATC GACAAACAGC TCGATAACGG TCAGAGCCGC 
GAAGAGTGGA AAGGGCAGGC GGAAACCAAC AAGATCCTCA ACACATCTTC CGTAATTCCG 
GTAGATGGTT TATGTGTGCG TGTCGGGGCA TTGCGCTGCC ACAGCCAGGC ATTCACTATT 
AAATTGAAAA AAGATGTGTC TATTCCGACC GTGGAAGAAC TGCTGGCTGC GCACAATCCG 
TGGGCGAAAG TCGTTCCGAA CGATCGGGAA ATCACTATGC GTGAGCTAAC CCCAGCTGCC 
GTTACCGGCA CGCTGACCAC GCCGGTAGGC CGCCTGCGTA AGCTGAATAT GGGACCAGAG 
TTCCTGTCAG CCTTTACAGT GGGCGACCAG CTGCTGTGGG GGGCCGCGGA GCCGCTGCGT 
CGGATGCTTC GTCAACTGGC GTAA
 
Protein sequence
MKNVGFIGWR GMVGSVLMQR MVEERDFDAI RPVFFSTSQL GQAAPSFGGT TGTLQDAFDL 
EALKALDIIV TCQGGDYTNE IYPKLRESGW QGYWIDAASS LRMKDDAIII LDPVNQDVIT 
DGLNNGIRTF VGGNCTVSLM LMSLGGLFAN DLVDWVSVAT YQAASGGGAR HMRELLTQMG 
HLYGHVADEL ATPSSAILDI ERKVTTLTRS GELPVDNFGV PLAGSLIPWI DKQLDNGQSR 
EEWKGQAETN KILNTSSVIP VDGLCVRVGA LRCHSQAFTI KLKKDVSIPT VEELLAAHNP 
WAKVVPNDRE ITMRELTPAA VTGTLTTPVG RLRKLNMGPE FLSAFTVGDQ LLWGAAEPLR 
RMLRQLA