Gene EcolC_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0259 
Symbol 
ID6067967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp297071 
End bp297997 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content56% 
IMG OID641599658 
Productbranched-chain amino acid transporter permease subunit LivH 
Protein accessionYP_001723265 
Protein GI170018311 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGC AGTTTTTGTA TTTCTTGCAG CAGATGTTTA ACGGCGTCAC GCTGGGCAGT 
ACCTACGCGC TGATAGCCAT CGGCTACACC ATGGTTTACG GCATTATCGG CATGATCAAC
TTCGCCCACG GCGAGGTTTA TATGATTGGC AGCTACGTCT CATTTATGAT CATCGCCGCG
CTGATGATGA TGGGCATTGA TACCGGCTGG CTGCTGGTGG CGGCGGGATT CGTCGGCGCA
ATCGTCATTG CCAGCGCCTA CGGCTGGAGT ATCGAACGGG TGGCTTACCG CCCGGTGCGT
AATTCTAAGC GCCTGATTGC GCTTATTTCC GCAATCGGTA TGTCCATCTT CCTGCAAAAC
TACGTCAGCC TGACCGAAGG TTCGCGCGAT GTGGCGCTGC CCAGCCTGTT TAACGGTCAG
TGGGTGGTGG GCCATAGCGA AAACTTCTCT GCCTCTATTA CCACCATGCA GGCGGTGATC
TGGATTGTCA CCTTCCTCGC CATGCTGGCG CTGACGATTT TCATTCGCTA TTCCCGTATG
GGGCGCGCCT GTCGTGCCTG CGCGGAAGAT CTGAAAATGG CGAGCCTGCT TGGCATCAAC
ACCGACCGGG TGATTGCTTT GACCTTTGTT ATTGGCGCGG CGATGGCGGC AGTGGCTGGC
GTACTGCTCG GTCAGTTCTA TGGCGTCATT AACCCCTATA TCGGCTTTAT GGCCGGGATG
AAAGCCTTTA CCGCTGCGGT GCTCGGTGGG ATTGGCAGCA TTCCAGGGGC GATGATTGGC
GGGCTGATCT TGGGGATTGC GGAGGCGCTC TCTTCTGCCT ATCTGAGTAC GGAATATAAG
GATGTGGTTT CATTTGCCCT GCTGATTCTG GTGCTGCTGG TGATGCCGAC CGGTATTCTG
GGTCGCCCGG AGGTAGAGAA AGTATGA
 
Protein sequence
MSEQFLYFLQ QMFNGVTLGS TYALIAIGYT MVYGIIGMIN FAHGEVYMIG SYVSFMIIAA 
LMMMGIDTGW LLVAAGFVGA IVIASAYGWS IERVAYRPVR NSKRLIALIS AIGMSIFLQN
YVSLTEGSRD VALPSLFNGQ WVVGHSENFS ASITTMQAVI WIVTFLAMLA LTIFIRYSRM
GRACRACAED LKMASLLGIN TDRVIALTFV IGAAMAAVAG VLLGQFYGVI NPYIGFMAGM
KAFTAAVLGG IGSIPGAMIG GLILGIAEAL SSAYLSTEYK DVVSFALLIL VLLVMPTGIL
GRPEVEKV