| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0200 |
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| Symbol | |
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| ID | 6065432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 227075 |
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| End bp | 228475 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641599601 |
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| Product | glutamate decarboxylase |
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| Protein accession | YP_001723208 |
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| Protein GI | 170018254 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.718769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAGA AGCTGTTAAC GGATTTCCGC TCAGAACTAC TCGATTCACG TTTTGGCGCA
AAGGCCATTT CTACTATCGC GGAGTCAAAA CGATTTCCGC TGCACGAAAT GCGCGATGAT
GTCGCATTCC AGATTATCAA TGATGAATTA TATCTTGATG GCAACGCTCG TCAGAACCTG
GCCACTTTCT GCCAGACCTG GGACGACGAA AACGTCCATA AATTGATGGA TTTGTCGATC
AATAAAAACT GGATCGACAA AGAAGAATAT CCGCAATCCG CAGCCATCGA CCTGCGTTGC
GTAAATATGG TTGCCGATCT GTGGCATGCG CCTGCGCCGA AAAATGGTCA GGCCGTTGGC
ACCAACACCA TTGGTTCTTC CGAGGCCTGT ATGCTCGGCG GGATGGCGAT GAAATGGCGT
TGGCGCAAGC GTATGGAAGC TGCAGGCAAA CCAACGGATA AACCAAACCT GGTGTGCGGT
CCGGTACAAA TCTGCTGGCA TAAATTCGCC CGCTACTGGG ATGTGGAGCT GCGTGAGATC
CCTATGCGCC CCGGTCAGTT GTTTATGGAC CCGAAACGCA TGATTGAAGC CTGTGACGAA
AACACCATCG GCGTGGTGCC GACTTTCGGC GTGACCTACA CCGGTAACTA TGAGTTCCCA
CAACCGCTGC ACGATGCGCT GGATAAATTC CAGGCCGACA CCGGTATCGA CATCGACATG
CACATCGACG CTGCCAGCGG TGGCTTCCTG GCACCGTTCG TCGCCCCGGA TATCGTCTGG
GACTTCCGCC TGCCGCGTGT GAAATCGATC AGTGCTTCAG GCCATAAATT CGGTCTGGCT
CCGCTGGGCT GCGGCTGGGT TATCTGGCGT GACGAAGAAG CGCTGCCGCA GGAACTGGTG
TTCAACGTTG ACTACCTGGG TGGTCAAATT GGTACTTTTG CCATCAACTT CTCCCGCCCG
GCGGGTCAGG TAATTGCACA GTACTATGAA TTCCTGCGCC TCGGTCGTGA AGGCTATACC
AAAGTACAGA ACGCCTCTTA CCAGGTTGCC GCTTATCTGG CGGATGAAAT CGCCAAACTG
GGGCCGTATG AGTTCATCTG TACGGGTCGC CCGGACGAAG GCATCCCGGC GGTTTGCTTC
AAACTGAAAG ATGGTGAAGA TCCGGGATAC ACCCTGTACG ACCTCTCTGA ACGTCTGCGT
CTGCGCGGCT GGCAGGTTCC GGCCTTCACT CTCGGCGGTG AAGCCACCGA CATCGTGGTG
ATGCGCATTA TGTGTCGTCG CGGCTTCGAA ATGGACTTTG CTGAACTGTT GCTGGAAGAC
TACAAAGCCT CCCTGAAATA TCTCAGCGAT CACCCGAAAC TGCAGGGTAT TGCCCAGCAG
AACAGCTTTA AACACACCTG A
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| Protein sequence | MDQKLLTDFR SELLDSRFGA KAISTIAESK RFPLHEMRDD VAFQIINDEL YLDGNARQNL
ATFCQTWDDE NVHKLMDLSI NKNWIDKEEY PQSAAIDLRC VNMVADLWHA PAPKNGQAVG
TNTIGSSEAC MLGGMAMKWR WRKRMEAAGK PTDKPNLVCG PVQICWHKFA RYWDVELREI
PMRPGQLFMD PKRMIEACDE NTIGVVPTFG VTYTGNYEFP QPLHDALDKF QADTGIDIDM
HIDAASGGFL APFVAPDIVW DFRLPRVKSI SASGHKFGLA PLGCGWVIWR DEEALPQELV
FNVDYLGGQI GTFAINFSRP AGQVIAQYYE FLRLGREGYT KVQNASYQVA AYLADEIAKL
GPYEFICTGR PDEGIPAVCF KLKDGEDPGY TLYDLSERLR LRGWQVPAFT LGGEATDIVV
MRIMCRRGFE MDFAELLLED YKASLKYLSD HPKLQGIAQQ NSFKHT
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