Gene EcolC_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0173 
Symbol 
ID6068240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp189893 
End bp190795 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content59% 
IMG OID641599575 
Productdipeptide transporter 
Protein accessionYP_001723182 
Protein GI170018228 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAGG TTACTGAAAA TAAAGTGATT AGCGCACCGG TGCCGATGAC CCCGTTACAG 
GAGTTCTGGC ACTATTTTAA ACGCAACAAA GGCGCGGTCG TCGGGCTGGT TTACGTCGTC
ATCGTGCTGT TCATCGCGAT CTTTGCCAAC TGGATTGCAC CCTATAACCC GGCGGAACAG
TTCCGCGATG CACTGCTCGC CCCGCCAGCC TGGCAGGAAG GCGGCAGCAT GGCGCACTTG
CTGGGCACCG ATGACGTAGG CCGTGATGTG CTGTCGCGCC TGATGTACGG TGCGCGCCTG
TCGCTGCTGG TTGGCTGTCT GGTAGTTGTG TTATCGCTGA TTATGGGCGT TATTCTCGGC
CTGATCGCCG GTTACTTTGG CGGCCTGGTC GATAACATCA TTATGCGCGT GGTCGATATC
ATGCTGGCGC TGCCAAGTCT GCTGCTGGCG CTGGTGCTGG TGGCAATTTT CGGCCCGTCG
ATTGGTAACG CCGCGCTGGC ACTGACCTTC GTTGCCTTGC CGCACTATGT GCGCTTAACC
CGCGCCGCCG TGCTGGTGGA AGTTAACCGC GATTACGTCA CCGCGTCTCG CGTGGCGGGT
GCCGGGGCGA TGCGTCAGAT GTTTATTAAC ATCTTCCCGA ACTGCCTTGC GCCGCTGATT
GTTCAGGCGT CGCTCGGTTT CTCTAACGCC ATTCTCGATA TGGCTGCTCT TGGTTTCCTC
GGCATGGGGG CACAGCCGCC AACGCCTGAG TGGGGCACCA TGCTCTCCGA CGTGTTGCAG
TTCGCGCAAA GCGCCTGGTG GGTCGTGACC TTCCCGGGTC TGGCGATCCT GCTGACGGTG
CTGGCATTTA ACCTGATGGG TGACGGTCTG CGTGACGCGC TCGATCCCAA ACTGAAGCAG
TAA
 
Protein sequence
MSQVTENKVI SAPVPMTPLQ EFWHYFKRNK GAVVGLVYVV IVLFIAIFAN WIAPYNPAEQ 
FRDALLAPPA WQEGGSMAHL LGTDDVGRDV LSRLMYGARL SLLVGCLVVV LSLIMGVILG
LIAGYFGGLV DNIIMRVVDI MLALPSLLLA LVLVAIFGPS IGNAALALTF VALPHYVRLT
RAAVLVEVNR DYVTASRVAG AGAMRQMFIN IFPNCLAPLI VQASLGFSNA ILDMAALGFL
GMGAQPPTPE WGTMLSDVLQ FAQSAWWVVT FPGLAILLTV LAFNLMGDGL RDALDPKLKQ