Gene EcolC_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0171 
Symbol 
ID6068251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp186949 
End bp188556 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content52% 
IMG OID641599573 
Product4-phytase 
Protein accessionYP_001723180 
Protein GI170018226 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATTT CCTTGAAAAA GTCAGGGATG CTGAAGCTTG GTCTCAGCCT GGTGGCTATG 
ACCGTCGCAG CAAGTGTTCA GGCTAAAACT CTGGTTTATT GCTCAGAAGG ATCTCCGGAA
GGGTTTAACC CGCAGCTGTT TACCTCCGGC ACCACCTATG ACGCCTCTTC CGTCCCGCTT
TATAACCGTC TGGTTGAATT TAAAATCGGC ACCACCGAAG TGATCCCGGG CCTCGCTGAA
AAGTGGGAAG TCAGCGAAGA CGGTAAAACC TATACCTTCC ATCTGCGTAA AGGTGTGAAG
TGGCACGACA ATAAAGAATT CAAACCGACG CGTGAACTGA ACGCCGATGA TGTGGTGTTC
TCGTTCGATC GTCAGAAAAA CGCGCAAAAC CCGTACCATA AAGTTTCTGG CGGCAGCTAC
GAATACTTCG AAGGCATGGG CTTGCCAGAG CTGATCAGTG AAGTGAAAAA GGTGGACGAC
AACACCGTTC AGTTTGTGCT GACTCGCCCG GAAGCGCCGT TCCTCGCTGA CCTGGCAATG
GACTTCGCCT CTATTCTGTC AAAAGAATAT GCTGATGCGA TGATGAAAGC CGGTACACCG
GAAAAACTGG ACCTCAACCC AATCGGAACC GGTCCGTTCC AGTTACAGCA GTATCAAAAA
GATTCCCGTA TCCGCTACAA AGCGTTTGAT GGCTACTGGG GCACCAAACC GCAGATCGAT
ACGCTGGTTT TCTCTATTAC CCCTGACGCT TCCGTGCGTT ACGCGAAATT GCAGAAGAAT
GAATGCCAGG TGATGCCGTA CCCGAACCCG GCAGATATCG CTCGCATGAA GCAGGATAAA
TCCATCAATC TGATGGAAAT GCCGGGGCTG AACGTCGGTT ATCTCTCGTA TAACGTGCAG
AAAAAACCAC TCGATGACGT GAAAGTTCGC CAGGCTCTGA CCTACGCGGT GAACAAAGAC
GCGATCATCA AAGCGGTTTA TCAGGGCGCG GGCGTATCAG CGAAAAACCT GATCCCGCCA
ACCATGTGGG GCTATAACGA CGACGTTCAG GACTACACCT ACGATCCTGA AAAAGCGAAA
GCCTTGCTGA AAGAAGCGGG TCTGGAAAAA GGTTTCTCCA TCGACCTGTG GGCGATGCCG
GTACAACGTC CGTATAACCC GAACGCTCGC CGCATGGCGG AGATGATTCA GGCAGACTGG
GCGAAAGTCG GCGTGCAGGC CAAAATTGTC ACCTACGAAT GGGGTGAGTA CCTCAAGCGT
GCGAAAGATG GCGAGCACCA GACGGTAATG ATGGGCTGGA CTGGCGATAA CGGGGATCCG
GATAACTTCT TCGCCACCCT GTTCAGCTGC GCCGCCTCTG AACAAGGCTC CAACTACTCA
AAATGGTGCT ACAAACCGTT TGAAGATCTG ATTCAACCGG CGCGTGCTAC CGACGACCAC
AATAAACGCG TTGAACTGTA CAAACAAGCG CAGGTGGTGA TGCACGATCA GGCTCCGGCA
CTGATCATCG CTCACTCCAC CGTGTTTGAA CCGGTACGTA AAGAAGTTAA AGGCTATGTG
GTTGATCCAT TAGGCAAACA TCACTTCGAA AACGTCTCTA TCGAATAA
 
Protein sequence
MRISLKKSGM LKLGLSLVAM TVAASVQAKT LVYCSEGSPE GFNPQLFTSG TTYDASSVPL 
YNRLVEFKIG TTEVIPGLAE KWEVSEDGKT YTFHLRKGVK WHDNKEFKPT RELNADDVVF
SFDRQKNAQN PYHKVSGGSY EYFEGMGLPE LISEVKKVDD NTVQFVLTRP EAPFLADLAM
DFASILSKEY ADAMMKAGTP EKLDLNPIGT GPFQLQQYQK DSRIRYKAFD GYWGTKPQID
TLVFSITPDA SVRYAKLQKN ECQVMPYPNP ADIARMKQDK SINLMEMPGL NVGYLSYNVQ
KKPLDDVKVR QALTYAVNKD AIIKAVYQGA GVSAKNLIPP TMWGYNDDVQ DYTYDPEKAK
ALLKEAGLEK GFSIDLWAMP VQRPYNPNAR RMAEMIQADW AKVGVQAKIV TYEWGEYLKR
AKDGEHQTVM MGWTGDNGDP DNFFATLFSC AASEQGSNYS KWCYKPFEDL IQPARATDDH
NKRVELYKQA QVVMHDQAPA LIIAHSTVFE PVRKEVKGYV VDPLGKHHFE NVSIE