| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0123 |
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| Symbol | |
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| ID | 6068371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 134964 |
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| End bp | 136808 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641599525 |
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| Product | selenocysteinyl-tRNA-specific translation factor |
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| Protein accession | YP_001723134 |
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| Protein GI | 170018180 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTATTG CGACTGCCGG ACACGTTGAC CACGGCAAAA CAACCTTATT GCAGGCGATT
ACTGGCGTAA ATGCTGACCG TCTGCCGGAA GAAAAAAAGC GCGGCATGAC CATCGATCTC
GGCTATGCCT ACTGGCCGCA GCCGGATGGT CGCGTGCCTG GTTTTATCGA CGTACCCGGT
CATGAAAAGT TTCTTTCCAA CATGCTGGCG GGCGTTGGTG GTATCGATCA CGCGCTGTTG
GTGGTGGCGT GCGATGACGG CGTGATGGCA CAGACCCGTG AGCATCTGGC GATTTTGCAG
CTGACCGGTA ACCCGATGCT GACAGTGGCG CTGACCAAAG CTGATCGCGT GGACGAAGCG
CGTGTTGATG AGGTTGAACG CCAGGTAAAG GAGGTTCTGC GGGAATACGG TTTTGCTGAG
GCAAAACTGT TTATCACCGC AGCAACCGAA GGTCGGGGAA TTGATGCCCT GCGCGAGCAT
CTGCTTCAGT TACCAGGACG TGAACACGCC AGCCAACATA GTTTCCGCCT CGCGATCGAC
CGCGCATTTA CCGTAAAAGG TGCCGGGCTG GTCGTCACCG GTACGGCGTT AAGCGGGGAA
GTGAAGGTAG GCGATTCACT CTGGCTGACT GGTGTAAATA AACCGATGCG TGTACGTGCG
CTGCATGCAC AAAACCAGCC AACAGAAACC GCCCATGCCG GGCAGCGTAT CGCGCTTAAC
ATCGCGGGTG ATGCGGAAAA AGAGCAGATT AACCGTGGCG ACTGGCTGCT TGCCGATGCG
CCGCCAGAGC CGTTCACACG GGTGATTGTC GAGCTTCAAA CCCATACGCC GCTGACCCAG
TGGCAGCCGC TGCATATTCA CCACGCCGCC AGCCACGTTA CGGGACGCGT TTCGCTGCTG
GAAGATAACC TTGCCGAGCT GGTGTTCGAC ACGCCGCTGT GGCTGGCGGA TAACGATCGC
TTAGTGCTGC GCGATATCTC GGCCCGCAAC ACGCTGGCGG GGGCGCGTGT GGTGATGCTT
AACCCGCCGC GTCGCGGTAA ACGTAAGCCG GAATATCTGC AATGGCTGGC GTCTCTTGCA
CGGGCGCAGA GCGATGCCGA TGCGTTATCT GTTCATCTGG AACGCGGCGC GGTTAACCTT
GCGGATTTCG CCTGGGCGCG CCAGCTCAAC GGCGAAGGGA TGCGCGAATT GCTGCAACAG
CCTGGTTATA TTCAGGCTGG TTATAGCTTG TTGAATGCGC CAGTTGCCGC CCGCTGGCAG
CGGAAAATTC TCGACACATT AGCGACTTAT CATGAGCAAC ATCGCGATGA ACCTGGTCCT
GGGCGCGAAC GTCTGCGACG TATGGCGTTG CCAATGGAAG ATGAAGCGCT GGTACTGTTG
CTGATTGAAA AGATGCGCGA AAGCGGCGAC ATCCTCAGTC ATCACGGTTG GCTGCATCTG
CCAGATCACA AAGCGGGCTT CAGCGAAGAG CAGCAGGCCA TCTGGCAAAA AGCAGAGCCG
CTGTTTGGTG ACGAGCCGTG GTGGGTGCGT GACCTGGCAA AAGAGACGGG AACCGACGAG
CAGGCAATGC GCCTGACGCT GCGCCAGGCG GCGCAGCAAG GAATAATTAC CGCGATCGTC
AAAGATCGTT ATTACCGTAA CGATCGGATT GTCGAATTTG CCAATATGAT CCGCGATCTC
GATCAGGAGT GTGGTTCAAC CTGCGCGGCG GATTTCCGCG ATCGCTTAGG CGTAGGCCGA
AAACTGGCAA TTCAGATTCT GGAATATTTT GACCGCATTG GCTTTACGCG TCGTCGTGGA
AATGATCATT TATTGCGCGA CGCATTATTA TTTCCGGAAA AATAA
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| Protein sequence | MIIATAGHVD HGKTTLLQAI TGVNADRLPE EKKRGMTIDL GYAYWPQPDG RVPGFIDVPG
HEKFLSNMLA GVGGIDHALL VVACDDGVMA QTREHLAILQ LTGNPMLTVA LTKADRVDEA
RVDEVERQVK EVLREYGFAE AKLFITAATE GRGIDALREH LLQLPGREHA SQHSFRLAID
RAFTVKGAGL VVTGTALSGE VKVGDSLWLT GVNKPMRVRA LHAQNQPTET AHAGQRIALN
IAGDAEKEQI NRGDWLLADA PPEPFTRVIV ELQTHTPLTQ WQPLHIHHAA SHVTGRVSLL
EDNLAELVFD TPLWLADNDR LVLRDISARN TLAGARVVML NPPRRGKRKP EYLQWLASLA
RAQSDADALS VHLERGAVNL ADFAWARQLN GEGMRELLQQ PGYIQAGYSL LNAPVAARWQ
RKILDTLATY HEQHRDEPGP GRERLRRMAL PMEDEALVLL LIEKMRESGD ILSHHGWLHL
PDHKAGFSEE QQAIWQKAEP LFGDEPWWVR DLAKETGTDE QAMRLTLRQA AQQGIITAIV
KDRYYRNDRI VEFANMIRDL DQECGSTCAA DFRDRLGVGR KLAIQILEYF DRIGFTRRRG
NDHLLRDALL FPEK
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