Gene EcolC_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0090 
SymbolrfaD 
ID6068344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp94882 
End bp95814 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content51% 
IMG OID641599494 
ProductADP-L-glycero-D-mannoheptose-6-epimerase 
Protein accessionYP_001723103 
Protein GI170018149 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.052498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.157359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCG TTACCGGCGG CGCGGGCTTT ATCGGCAGCA ACATCGTTAA GGCCCTGAAT 
GATAAAGGCA TCACCGATAT TCTGGTGGTG GACAACCTGA AAGACGGCAC CAAGTTTGTG
AACCTGGTGG ATCTGGATAT CGCGGACTAT ATGGATAAGG AAGACTTCCT GATCCAGATT
ATGGCTGGCG AAGAGTTCGG CGATGTCGAA GCGATTTTCC ACGAAGGCGC ATGCTCTTCC
ACCACCGAGT GGGACGGCAA GTATATGATG GATAACAACT ATCAATACTC CAAGGAGCTG
CTGCACTACT GCCTGGAGCG CGAAATCCCG TTCCTGTACG CTTCTTCCGC AGCCACCTAC
GGCGGACGCA CCTCCGACTT TATTGAATCC CGCGAGTACG AAAAACCGTT GAACGTCTAC
GGTTACTCAA AATTCCTGTT TGATGAATAT GTTCGCCAAA TCCTGCCTGA AGCGAACTCG
CAGATTGTTG GCTTCCGCTA TTTCAACGTT TATGGACCGC GTGAAGGCCA TAAAGGCAGC
ATGGCGAGCG TCGCTTTCCA TCTCAACACT CAGCTTAACA AAGGTGAATC ACCGAAGCTG
TTTGAAGGTA GCGAGAACTT CAAACGTGAC TTCGTCTATG TGGGCGACGT GGCAGATGTA
AACCTGTGGT TCCTGGAAAA TGGCGTTTCC GGTATCTTCA ACCTCGGTAC TGGTCGTGCG
GAATCCTTCC AGGCCGTAGC AGATGCTACT CTGGCTTATC ACAAGAAAGG CCAGATCGAA
TACATTCCGT TCCCGGATAA GCTGAAAGGC CGCTACCAGG CGTTCACTCA GGCAGATCTG
ACAAATCTGC GCGCGGCGGG TTACGACAAA CCGTTCAAAA CCGTTGCTGA AGGTGTAATG
GAATACATGG CCTGGCTGAA TCGCGACGCA TAA
 
Protein sequence
MIIVTGGAGF IGSNIVKALN DKGITDILVV DNLKDGTKFV NLVDLDIADY MDKEDFLIQI 
MAGEEFGDVE AIFHEGACSS TTEWDGKYMM DNNYQYSKEL LHYCLEREIP FLYASSAATY
GGRTSDFIES REYEKPLNVY GYSKFLFDEY VRQILPEANS QIVGFRYFNV YGPREGHKGS
MASVAFHLNT QLNKGESPKL FEGSENFKRD FVYVGDVADV NLWFLENGVS GIFNLGTGRA
ESFQAVADAT LAYHKKGQIE YIPFPDKLKG RYQAFTQADL TNLRAAGYDK PFKTVAEGVM
EYMAWLNRDA