Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0089 |
Symbol | |
ID | 6068622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 93826 |
End bp | 94872 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641599493 |
Product | ADP-heptose:LPS heptosyltransferase II |
Protein accession | YP_001723102 |
Protein GI | 170018148 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000834595 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.156713 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAC TGGTGATCGG CCCGTCTTGG GTTGGCGACA TGATGATGTC GCAAAGTCTC TATCGCACGC TCCAGGCGCG CTATCCCCAG GCGATAATCG ATGTGATGGC ACCGGCATGG TGCCGTCCAT TATTATCGCG GATGCCGGAA GTTAACGAAG CTATCCCTAT GCCTCTCGGT CACGGAGCGC TGGAAATCGG CGAACGCCGC AAACTGGGTC ATAGCCTGCG TGAAAAGCGC TACGACCGCG CCTACGTCTT ACCAAACTCC TTCAAATCTG CATTAGTGCC TTTCTTCGCG GGTATTCCTC ATCGCACTGG CTGGCGCGGC GAGATGCGCT ACGGTTTACT CAACGATGTA CGCGTGCTCG ATAAAGAAGC CTGGCCGCTA ATGGTGGAAC GCTATGTCGC GCTGGCCTAT GACAAAGGCA TTATGCGTAC CGCACAAGAT CTGCCGCAGC CATTGTTATG GCCGCAGTTG CAGGTGAGCG AAGGTGAAAA ATCATATACC TGTAATCAAT TTTCGCTTTC ATCAGAACGT CCGATGATTG GCTTTTGCCC GGGTGCGGAG TTTGGTCCGG CAAAACGCTG GCCACACTAC CACTATGCGG AGCTGGCAAA GCAGCTGATT GATGAAGGTT ATCAGGTGGT TCTGTTTGGC TCTGCGAAAG ATCATGAAGC GGGCAATGAG ATTCTTGCCG CTTTGAATAC CGAGCAGCAG GCATGGTGTC GGAACCTGGC GGGGGAAACA CAGCTTGATC AAGCGGTTAT CCTGATTGCA GCCTGTAAAG CCATTGTCAC TAACGATTCT GGCCTAATGC ACGTTGCGGC GGCGCTCAAT CGTCCGCTGG TTGCCCTGTA TGGTCCGAGT AGCCCGGACT TCACACCGCC GCTATCCCAT AAAGCGCGCG TGATCCGTCT GATTACCGGC TATCACAAAG TGCGTAAAGG TGACGCTGCG GAGGGTTATC ACCAGAGCTT GATCGACATT ACTCCCCAGC GCGTACTGGA AGAACTCAAC GCGCTATTGT TACAAGAGGA AGCCTGA
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Protein sequence | MKILVIGPSW VGDMMMSQSL YRTLQARYPQ AIIDVMAPAW CRPLLSRMPE VNEAIPMPLG HGALEIGERR KLGHSLREKR YDRAYVLPNS FKSALVPFFA GIPHRTGWRG EMRYGLLNDV RVLDKEAWPL MVERYVALAY DKGIMRTAQD LPQPLLWPQL QVSEGEKSYT CNQFSLSSER PMIGFCPGAE FGPAKRWPHY HYAELAKQLI DEGYQVVLFG SAKDHEAGNE ILAALNTEQQ AWCRNLAGET QLDQAVILIA ACKAIVTNDS GLMHVAAALN RPLVALYGPS SPDFTPPLSH KARVIRLITG YHKVRKGDAA EGYHQSLIDI TPQRVLEELN ALLLQEEA
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