| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0085 |
|---|
| Symbol | |
|---|
| ID | 6068369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 89389 |
|---|
| End bp | 90414 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641599489 |
|---|
| Product | lipopolysaccharide glucosyltransferase I |
|---|
| Protein accession | YP_001723098 |
|---|
| Protein GI | 170018144 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.416805 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0154654 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAT TAGCTGAGAG TATTACTGAA GTCGCTGTCT CTGGGGAAAT TGCTAACACC
GATCGTGTGT TAAATATCGC TTACGGTATT GACCGTAACT TTTTATTTGG TGCGGCAGTA
TCTATGCAAT CAGTTGTTAT GCATAACCCG GACCTTGCGG TTAAGTTTCA TCTCTTTACC
GACTACATTG ATGAAGATTA TCTACAACGT GTTAATGCTT TTACCAGCAA AAATGCTAAC
GTTGAAGTAA GAATTTATAA AGTCTCCAAT GCCTTTATTG ATATCTTCCC CAGCCTGAAA
CAGTGGTCTT ATGCAACATT CTTCCGTTTA GTTGCGTTCC AGTATCTGAG TGAAACTATT
GAAAATCTGT TATATATCGA TGCTGATGTC ATCTGTAAAG GCTCATTAGC TGGATTGCTT
GATATTAATT TTGATGGGGA TAAGTTTGCA GCTGTTATTA AAGATGTGCC TTTTATGCAG
GAAAAACCAG CGAAGCGTCT GGCTATAGAG GGACTTCCAG GGAATTATTT CAACGCCGGT
GTAGTATATC TGCAGCTTGA AGCATGGGCG AAAAATGATT TTATGAATAA AGCCATTGCT
ATGCTGGCAA GTGACCCGCA GCACACGAAG TATAAATGCC TTGATCAGGA TATTTTAAAT
ATTCTGTTTT TTGGTCATTG TATTTTTATT AGCGGCGATT ATGATTGCTT TTATGGCATC
GATTATGAGT TAAAAAATAA AAGCGATGAA GATTATAAAA AGACCATTAC CGATGATACT
AAGCTGATTC ATTATGTTGG CGTAACGAAG CCCTGGAACG ACTGGACGAA TTATCCCTGC
CAGAACTATT TTAATGAGGC TTATCAGGCT TCTTGCTGGA ATGATGTGGC GTTTATTCCA
GCCACGAATG AAAAGCAGTA TCAAGTGAAA TATCAACATG CAAAGAAAAA TGGTGATACG
TTTAACGCTT TTATTTACTT CATTAAATTT AAATTAAATA AGTATAAAAG AAAACTATTT
GGGTAA
|
|---|
| Protein sequence | MDLLAESITE VAVSGEIANT DRVLNIAYGI DRNFLFGAAV SMQSVVMHNP DLAVKFHLFT
DYIDEDYLQR VNAFTSKNAN VEVRIYKVSN AFIDIFPSLK QWSYATFFRL VAFQYLSETI
ENLLYIDADV ICKGSLAGLL DINFDGDKFA AVIKDVPFMQ EKPAKRLAIE GLPGNYFNAG
VVYLQLEAWA KNDFMNKAIA MLASDPQHTK YKCLDQDILN ILFFGHCIFI SGDYDCFYGI
DYELKNKSDE DYKKTITDDT KLIHYVGVTK PWNDWTNYPC QNYFNEAYQA SCWNDVAFIP
ATNEKQYQVK YQHAKKNGDT FNAFIYFIKF KLNKYKRKLF G
|
|---|
| |