Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0074 |
Symbol | rpmB |
ID | 6068399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 80101 |
End bp | 80337 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641599478 |
Product | 50S ribosomal protein L28 |
Protein accession | YP_001723087 |
Protein GI | 170018133 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0227] Ribosomal protein L28 |
TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000990162 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000134659 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCCGAG TCTGCCAAGT TACTGGCAAG CGTCCGGTGA CCGGTAACAA CCGTTCCCAC GCACTGAACG CGACTAAACG CCGTTTCCTG CCGAACCTGC ACTCTCACCG TTTCTGGGTT GAGAGCGAGA AGCGTTTTGT CACCCTGCGC GTATCTGCTA AAGGTATGCG TGTAATCGAT AAAAAAGGCA TCGATACAGT TCTGGCTGAA CTGCGTGCCC GTGGCGAAAA GTACTAA
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Protein sequence | MSRVCQVTGK RPVTGNNRSH ALNATKRRFL PNLHSHRFWV ESEKRFVTLR VSAKGMRVID KKGIDTVLAE LRARGEKY
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