Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0061 |
Symbol | |
ID | 6068417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 67265 |
End bp | 69373 |
Gene Length | 2109 bp |
Protein Length | 702 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641599465 |
Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
Protein accession | YP_001723074 |
Protein GI | 170018120 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000381155 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTATCTGT TTGAAAGCCT GAATCAACTG ATTCAAACCT ACCTGCCGGA AGACCAAATC AAGCGTCTGC GGCAGGCGTA TCTCGTTGCA CGTGATGCTC ACGAGGGGCA AACACGTTCA AGCGGTGAAC CCTATATCAC GCACCCGGTA GCGGTTGCCT GCATTCTGGC CGAGATGAAA CTCGACTATG AAACGCTGAT GGCGGCGCTG CTGCATGACG TGATTGAAGA TACTCCCGCC ACCTACCAGG ATATGGAACA GCTTTTTGGT AAAAGCGTCG CCGAGCTGGT AGAGGGGGTG TCGAAACTTG ATAAACTCAA GTTCCGCGAT AAGAAAGAGG CGCAGGCCGA AAACTTTCGC AAGATGATTA TGGCGATGGT GCAGGATATC CGCGTCATCC TCATCAAACT TGCCGACCGT ACCCACAACA TGCGCACGCT GGGCTCACTT CGCCCGGACA AACGTCGCCG CATCGCCCGT GAAACTCTCG AAATTTACAG CCCGCTGGCG CACCGTTTAG GTATCCACCA CATTAAAACC GAACTCGAAG AGCTGGGTTT TGAGGCGCTG TATCCCAACC GTTATCGCGT AATCAAAGAA GTGGTGAAAG CCGCGCGCGG CAACCGTAAA GAGATGATCC AGAAGATTCT TTCTGAAATC GAAGGGCGTT TGCAGGAAGC GGGAATACCG TGCCGCGTCA GTGGTCGCGA GAAGCATCTT TATTCGATTT ACTGCAAAAT GGTGCTCAAA GAGCAGCGTT TTCACTCGAT CATGGACATC TACGCTTTCC GCGTGATCGT CAATGATTCT GACACCTGTT ATCGCGTGCT GGGCCAGATG CACAGCCTGT ACAAGCCGCG TCCGGGCCGC GTGAAAGACT ATATCGCCAT TCCAAAAGCG AACGGCTATC AGTCTTTGCA CACCTCGATG ATCGGCCCGC ACGGTGTGCC GGTTGAGGTC CAGATCCGTA CCGAAGATAT GGACCAGATG GCGGAGATGG GTGTTGCCGC GCACTGGGCT TATAAAGAGC ACGGCGAAAC CAGTACTACC GCACAAATCC GCGCCCAGCG CTGGATGCAA AGCCTGCTGG AGCTGCAACA GAGCGCCGGT AGTTCGTTTG AATTTATCGA GAGCGTTAAA TCCGATCTCT TCCCGGATGA GATTTACGTT TTCACACCGG AAGGGCGCAT TGTCGAGCTG CCTGCCGGTG CAACGCCCGT CGACTTCGCT TATGCAGTGC ATACCGATAT CGGCCATGCC TGCGTGGGCG CACGCGTTGA CCGCCAGCCT TACCCGCTGT CGCAGCCGCT TACCAGCGGT CAAACCGTTG AAATCATTAC CGCTCCGGGC GCTCGCCCGA ATGCCGCGTG GCTGAACTTT GTCGTTAGCT CGAAAGCGCG CGCCAAAATT CGTCAGTTGC TGAAAAACCT CAAGCGTGAT GATTCTGTAA GCCTGGGCCG TCGTCTGCTC AACCATGCTT TGGGTGGTAG CCGTAAGCTG AATGAAATCC CGCAGGAAAA TATTCAGCGC GAGCTGGATC GCATGAAGCT GGCAACGCTT GACGATCTGC TGGCAGAAAT CGGACTTGGT AACGCAATGA GCGTGGTGGT CGCGAAAAAT CTGCAACATG GGGACGCCTC CATTCCACCG GCAACCCAAA GCCACGGACA TCTGCCCATT AAAGGTGCCG ATGGCGTGCT GATCACCTTT GCGAAATGCT GCCGCCCTAT TCCTGGCGAC CCGATTATCG CCCACGTCAG CCCCGGTAAA GGTCTGGTGA TCCACCATGA ATCCTGCCGT AATATCCGTG GCTACCAGAA AGAGCCAGAG AAGTTTATGG CTGTGGAATG GGATAAAGAG ACGGCGCAGG AGTTCATCAC CGAAATCAAG GTGGAGATGT TCAATCATCA GGGTGCGCTG GCAAACCTGA CGGCGGCAAT TAACACCACG ACTTCGAATA TTCAAAGTTT GAATACGGAA GAGAAAGATG GTCGCGTCTA CAGCGCCTTT ATTCGTCTGA CCGCTCGTGA CCGTGTGCAT CTGGCGAATA TCATGCGCAA AATCCGCGTG ATGCCAGACG TGATTAAAGT CACCCGAAAC CGAAATTAA
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Protein sequence | MYLFESLNQL IQTYLPEDQI KRLRQAYLVA RDAHEGQTRS SGEPYITHPV AVACILAEMK LDYETLMAAL LHDVIEDTPA TYQDMEQLFG KSVAELVEGV SKLDKLKFRD KKEAQAENFR KMIMAMVQDI RVILIKLADR THNMRTLGSL RPDKRRRIAR ETLEIYSPLA HRLGIHHIKT ELEELGFEAL YPNRYRVIKE VVKAARGNRK EMIQKILSEI EGRLQEAGIP CRVSGREKHL YSIYCKMVLK EQRFHSIMDI YAFRVIVNDS DTCYRVLGQM HSLYKPRPGR VKDYIAIPKA NGYQSLHTSM IGPHGVPVEV QIRTEDMDQM AEMGVAAHWA YKEHGETSTT AQIRAQRWMQ SLLELQQSAG SSFEFIESVK SDLFPDEIYV FTPEGRIVEL PAGATPVDFA YAVHTDIGHA CVGARVDRQP YPLSQPLTSG QTVEIITAPG ARPNAAWLNF VVSSKARAKI RQLLKNLKRD DSVSLGRRLL NHALGGSRKL NEIPQENIQR ELDRMKLATL DDLLAEIGLG NAMSVVVAKN LQHGDASIPP ATQSHGHLPI KGADGVLITF AKCCRPIPGD PIIAHVSPGK GLVIHHESCR NIRGYQKEPE KFMAVEWDKE TAQEFITEIK VEMFNHQGAL ANLTAAINTT TSNIQSLNTE EKDGRVYSAF IRLTARDRVH LANIMRKIRV MPDVIKVTRN RN
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