Gene EcolC_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0021 
Symbol 
ID6068488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp21790 
End bp23112 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content53% 
IMG OID641599426 
Productglycoside hydrolase family protein 
Protein accessionYP_001723036 
Protein GI170018082 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAT TCTCAGGGGT TGTCGCAGGC GGTGGAAGCA CCTTTACGCC AGGCATCGTG 
TTGATGCTCC TGGCGAATCA GGACCGTTTC CCGCTTCGTG CACTGAAATT TTATGATAAC
GATGGTGCGC GGCAGGAAGT GATTGCCGAA GCCTGTAAAG TCATCCTTAA AGAAAAAGCG
CCGGACATTG CGTTTAGTTA CACCACCGAT CCTGAAGTGG CATTCAGCGA CGTTGATTTT
GTCATGGCGC ACATCCGCGT CGGCAAATAC CCGATGCGCG AACTGGATGA AAAAATCCCG
CTGCGCCACG GCGTTGTTGG TCAGGAAACT TGCGGACCCG GCGGAATAGC GTACGGCATG
CGTTCCATTG GCGGCGTCCT GGAACTGGTG GATTATATGG AAAAATATTC ACCAAATGCC
TGGATGCTCA ACTACTCCAA CCCGGCAGCC ATTGTCGCAG AAGCCACGCG TCGTCTGCGC
CCGAATGCGA AAATCCTCAA CATCTGTGAC ATGCCAATCG GTATTGAAAG CCGGATGGCG
CAAATTGTTG GGCTGCAAGA TCGCAAACAG ATGCGCGTGC GCTACTACGG CCTGAACCAC
TTTGGCTGGT GGACATCAAT TGAAGATTTG CAGGGCAACG ACCTGATGCC CCAGCTGCGG
CAATATGTCT CTAAGCATGG TTATGTTCCA CCGCAGCAAG ATACGCATAC TGAAGCGAGC
TGGAACGACA CCTATGCAAA AGCGCGGGAT GTCCAGGCAC TGGCCCCGGA TACATTACCA
AACACCTATC TGAAATATTA TCTCTTCCCG GATTACGTCG TTCAGCATTC CAACCCTGAA
CATACCCGCG CGAATGAGGT GATGGAACAT CGCGAGAAAC AGGTTTTCGA TGCTTGCCGC
GCCATTACGG CGGCAGGAAA TTCAGCGGCG GGCAAGCTGG AAATTGACGA ACATGCGTCA
TACATCGTCG ATCTGGCGGC GGCAATTGCC TTCAACACTC AGGAGCGGAT GTTGCTGATT
GTGCCTAACA ACGGGGCAAT TCATAACTTT GATGATGAAG CGATGGTCGA GATCCCGTGT
CTGGTTGGGC ACAACGGACC AGAACCACTG GTGGTCGGCG ATATCCCGCA GTTTCAGAAA
GGGTTAATGA GTCAGCAAGT GGCGGTGGAA AAACTGGTCG TGGACGCCTG GGAACAGCGT
TCATATCAGC ACCTGTGGCA GGCGATTACG TTGTCGAAAA CGGTACCGAG CGCCTCGGTC
GCCAAAGCTA TTCTGGATGA ATTGCTGGAG GCCAACAAAG CGTACTGGCC AGAGTTACGT
TAA
 
Protein sequence
MTKFSGVVAG GGSTFTPGIV LMLLANQDRF PLRALKFYDN DGARQEVIAE ACKVILKEKA 
PDIAFSYTTD PEVAFSDVDF VMAHIRVGKY PMRELDEKIP LRHGVVGQET CGPGGIAYGM
RSIGGVLELV DYMEKYSPNA WMLNYSNPAA IVAEATRRLR PNAKILNICD MPIGIESRMA
QIVGLQDRKQ MRVRYYGLNH FGWWTSIEDL QGNDLMPQLR QYVSKHGYVP PQQDTHTEAS
WNDTYAKARD VQALAPDTLP NTYLKYYLFP DYVVQHSNPE HTRANEVMEH REKQVFDACR
AITAAGNSAA GKLEIDEHAS YIVDLAAAIA FNTQERMLLI VPNNGAIHNF DDEAMVEIPC
LVGHNGPEPL VVGDIPQFQK GLMSQQVAVE KLVVDAWEQR SYQHLWQAIT LSKTVPSASV
AKAILDELLE ANKAYWPELR