Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0006 |
Symbol | |
ID | 6068520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 6825 |
End bp | 7637 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641599411 |
Product | sugar phosphatase |
Protein accession | YP_001723021 |
Protein GI | 170018067 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATCA AACTCATTGC TATCGATATG GATGGCACCC TTCTGCTACC CGATCACACC ATTTCACCCG CCGTTAAAAA TGCGATTGCC GCAGCTCGCG CCCGTGGCGT GAATGTCGTG CTAACGACGG GTCGCCCTTA TGCAGGTGTT CACAATTACC TGAAAGAGCT GCATATGGAA CTGCCGGGCG ACTACTGCAT TACTTATAAC GGCGCGCTGG TACAGAAGGC CGCTGATGGT AGCACCGTGG CGCAAACCGC TCTCAGCTAT GACGACTACC GTTTCCTGGA AAAACTCTCT CGCGAAGTCG GTTCTCATTT CCACGCCCTG GACCGCACCA CGCTGTACAC CGCCAACCGT GATATCAGCT ACTACACGGT GCATGAATCC TTCGTTGCCA CAATTCCGCT GGTGTTCTGC GAAGCGGAGA AAATGGACCC CAATACCCAG TTCCTGAAAG TGATGATGAT TGATGAACCC GCCATCCTCG ACCAGGCTAT CGCGCGTATT CCGCAGGAAG TGAAAGAGAA ATATACCGTG CTGAAAAGTG CGCCGTACTT CCTCGAAATC CTCGATAAAC GCGTTAACAA AGGTACGGGG GTGAAATCAC TGGCCGACGT GTTAGGTATT AAACCGGAAG AAATCATGGC GATTGGCGAT CAGGAAAACG ATATCGCAAT GATTGAATAT GCAGGCGTCG GTGTGGCGAT GGATAACGCT ATTCCTTCAG TGAAAGAAGT GGCGAACTTT GTCACCAAAT CTAACCTTGA AGATGGCGTG GCGTTTGCTA TTGAGAAGTA TGTGCTGAAT TAA
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Protein sequence | MAIKLIAIDM DGTLLLPDHT ISPAVKNAIA AARARGVNVV LTTGRPYAGV HNYLKELHME LPGDYCITYN GALVQKAADG STVAQTALSY DDYRFLEKLS REVGSHFHAL DRTTLYTANR DISYYTVHES FVATIPLVFC EAEKMDPNTQ FLKVMMIDEP AILDQAIARI PQEVKEKYTV LKSAPYFLEI LDKRVNKGTG VKSLADVLGI KPEEIMAIGD QENDIAMIEY AGVGVAMDNA IPSVKEVANF VTKSNLEDGV AFAIEKYVLN
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