Gene EcolC_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0006 
Symbol 
ID6068520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp6825 
End bp7637 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content51% 
IMG OID641599411 
Productsugar phosphatase 
Protein accessionYP_001723021 
Protein GI170018067 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCA AACTCATTGC TATCGATATG GATGGCACCC TTCTGCTACC CGATCACACC 
ATTTCACCCG CCGTTAAAAA TGCGATTGCC GCAGCTCGCG CCCGTGGCGT GAATGTCGTG
CTAACGACGG GTCGCCCTTA TGCAGGTGTT CACAATTACC TGAAAGAGCT GCATATGGAA
CTGCCGGGCG ACTACTGCAT TACTTATAAC GGCGCGCTGG TACAGAAGGC CGCTGATGGT
AGCACCGTGG CGCAAACCGC TCTCAGCTAT GACGACTACC GTTTCCTGGA AAAACTCTCT
CGCGAAGTCG GTTCTCATTT CCACGCCCTG GACCGCACCA CGCTGTACAC CGCCAACCGT
GATATCAGCT ACTACACGGT GCATGAATCC TTCGTTGCCA CAATTCCGCT GGTGTTCTGC
GAAGCGGAGA AAATGGACCC CAATACCCAG TTCCTGAAAG TGATGATGAT TGATGAACCC
GCCATCCTCG ACCAGGCTAT CGCGCGTATT CCGCAGGAAG TGAAAGAGAA ATATACCGTG
CTGAAAAGTG CGCCGTACTT CCTCGAAATC CTCGATAAAC GCGTTAACAA AGGTACGGGG
GTGAAATCAC TGGCCGACGT GTTAGGTATT AAACCGGAAG AAATCATGGC GATTGGCGAT
CAGGAAAACG ATATCGCAAT GATTGAATAT GCAGGCGTCG GTGTGGCGAT GGATAACGCT
ATTCCTTCAG TGAAAGAAGT GGCGAACTTT GTCACCAAAT CTAACCTTGA AGATGGCGTG
GCGTTTGCTA TTGAGAAGTA TGTGCTGAAT TAA
 
Protein sequence
MAIKLIAIDM DGTLLLPDHT ISPAVKNAIA AARARGVNVV LTTGRPYAGV HNYLKELHME 
LPGDYCITYN GALVQKAADG STVAQTALSY DDYRFLEKLS REVGSHFHAL DRTTLYTANR
DISYYTVHES FVATIPLVFC EAEKMDPNTQ FLKVMMIDEP AILDQAIARI PQEVKEKYTV
LKSAPYFLEI LDKRVNKGTG VKSLADVLGI KPEEIMAIGD QENDIAMIEY AGVGVAMDNA
IPSVKEVANF VTKSNLEDGV AFAIEKYVLN