| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0526 |
|---|
| Symbol | ispH |
|---|
| ID | 3618159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia canis str. Jake |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007354 |
|---|
| Strand | + |
|---|
| Start bp | 759707 |
|---|
| End bp | 760666 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637698471 |
|---|
| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
|---|
| Protein accession | YP_303160 |
|---|
| Protein GI | 73667144 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0761] Penicillin tolerance protein |
|---|
| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.648595 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAAA TTTTAAAAAA AAATGTAGAA GTCATACTTG CAAATCCAAG AGGATTCTGT
GCAGGAGTAT CCAGAGCAAT AGAAATTGTA GAATTAGCTA TAAAATACCA TAGCAATAAC
AGAAAAGTTT ATGTATTACA TGAAATTGTA CATAATAAAT ATATAATTAA TTCTTTAAAA
GAGATGGGTG TACTTTTTAT AGATACACTA GATCAAGCTG AAGATGGATC AATACTCATA
TACAGTGCAC ATGGTGTCTC AAAAGAAATA GAACACCTTG CACAACTACG TAATCTAGAG
ATAATAAATG CAACATGTCC ACTAGTAACC AAAGTACATA AAGAAGTACA GTCTTACGAC
AGAGAAGGAT ATCAAATAAT ATTGATTGGT CATAAAGGAC ACCGTGAAGT AGAAGGAACT
ATCGGGCAAA TAACAACACC TGTACTATTA GTACAAACCA TATCTGATAT TGACAATATA
GCAGTTGTTA ACCAAAATAA GCTTGCATAT GTAACACAAA CTACTCTAAG TGTAGATGAT
ACAAAAGAAA TAATTAATAA GTTGAAACAA AAATTTCCTA ATATTAAAGG ACCAGATTTA
AAAGACATAT GTTATGCTAC TCAAAATAGG CAAAATGCTG TAAAACAATT ATCAGAACTA
GTAGACATTG TGTTTATACT AGGGAGTAAA AACAGTTCAA ATTCAAATCG TCTCAAAGAA
CTAGCTAAAT TAAAAGCCCC TGCTTTTTTA ATAGATTCTT ATAAGGAAAT TGACTTAAGT
CTTCTACAAA ATGTAGAAAA AATTGGGATA ACTGCAGGAG CATCAGCTCC AGAAATATTA
ATAACAGAAG TTATAGATTC ACTTAAACAA CACCTAAACA TCAAGTTATC AAACTTAGAA
ATCACTAAAG AAAATATTGC TTTCAATATA CCAAAACAAC TAAGAGAATA TAAACAATAA
|
|---|
| Protein sequence | MDQILKKNVE VILANPRGFC AGVSRAIEIV ELAIKYHSNN RKVYVLHEIV HNKYIINSLK
EMGVLFIDTL DQAEDGSILI YSAHGVSKEI EHLAQLRNLE IINATCPLVT KVHKEVQSYD
REGYQIILIG HKGHREVEGT IGQITTPVLL VQTISDIDNI AVVNQNKLAY VTQTTLSVDD
TKEIINKLKQ KFPNIKGPDL KDICYATQNR QNAVKQLSEL VDIVFILGSK NSSNSNRLKE
LAKLKAPAFL IDSYKEIDLS LLQNVEKIGI TAGASAPEIL ITEVIDSLKQ HLNIKLSNLE
ITKENIAFNI PKQLREYKQ
|
|---|
| |