| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0393 |
|---|
| Symbol | |
|---|
| ID | 3617607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia canis str. Jake |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007354 |
|---|
| Strand | + |
|---|
| Start bp | 592096 |
|---|
| End bp | 592863 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637698341 |
|---|
| Product | triosephosphate isomerase |
|---|
| Protein accession | YP_303034 |
|---|
| Protein GI | 73667018 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00120679 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAA GTCTTATAGC CGGCACGTTA TTTTTAGTAA TTTTTATGTC ATTGCTCATC
GTTGCTAATT GGAAGATGTA TGGTGACTTT ATTACCTTTT CCTCTTTTAC AAAGGAATTA
AGTATTAATT TAACTAATGT AAAGGCTGAT TTAGAGGTAG TGTTATGTCC ACCTTTTATT
GCACTACCTA AAGTGGTTGA TTGTATTTCT TGTATTAAGT TTGGTGCACA GAATTGCTTT
TATGAAACTG AAGGAAAATA TACTGGTGAA GTTAGTGCGA AAATGTTATA TGATTGTGGA
TGTAGTTATG TAATAGTTGG TCATTCTGAA AGAAGAAGCA TATTTCATGA ATCTGATTAC
CATGTACAGT TGAAAGCAAG TGCTGCTATT AAATCTGGGT TGATACCAAT TGTTTGTGTT
GGAGAAACTT TATTAGATAG AGAAAATGGT ATGCTAAAAG ACTCATTATT AAATCAATGT
TATAATTCTT TTCCTAAAAG TGGTAAATTT ATTATAGCTT ATGAGCCTGT GTGGGCAATA
GGGAGTAATA CTATACCTTC TATTGATATG ATAACTGAAG CTTTAGAGGT TATTAGGTCA
TACGATAGTA CATCTGACAT TATATATGGT GGTGCAGTAA ATCAAGATAA TATAAGAGAT
GTTATTGCTA TAAATCAATT ATCTGGTGTA TTGGTTGGTA GTGCAAGTTT AAAATTAGAT
AGTTTTTATA ATATAATACA TGGTGCTGTA AATGTGAGGC AAAACTAA
|
|---|
| Protein sequence | MSSSLIAGTL FLVIFMSLLI VANWKMYGDF ITFSSFTKEL SINLTNVKAD LEVVLCPPFI
ALPKVVDCIS CIKFGAQNCF YETEGKYTGE VSAKMLYDCG CSYVIVGHSE RRSIFHESDY
HVQLKASAAI KSGLIPIVCV GETLLDRENG MLKDSLLNQC YNSFPKSGKF IIAYEPVWAI
GSNTIPSIDM ITEALEVIRS YDSTSDIIYG GAVNQDNIRD VIAINQLSGV LVGSASLKLD
SFYNIIHGAV NVRQN
|
|---|
| |