Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_A0153 |
Symbol | tetA |
ID | 6106627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010488 |
Strand | + |
Start bp | 120487 |
End bp | 121761 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641614892 |
Product | tetracycline resistance protein, class A |
Protein accession | YP_001740033 |
Protein GI | 170650807 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACCA ACTTATCAGT GATAAAGAAT CCGCGCGTTC AATCGGACCA GCGGAGGCTG GTCCGGAGGC CAGACGTGAA ACCCAACAGA CCCCTGATCG TAATTCTGAG CACTGTCGCG CTCGACGCTG TCGGCATCGG CCTGATTATG CCGGTGCTGC CGGGCCTCCT GCGCGATCTG GTTCACTCGA ACGACGTCAC CGCCCACTAT GGCATTCTGC TGGCGCTGTA TGCGTTGATG CAATTTGCCT GCGCACCTGT GCTGGGCGCG CTGTCGGATC GTTTCGGGCG GCGGCCGGTC TTGCTCGTCT CGCTGGCCGG CGCTGCTGTC GACTACGCCA TCATGGCGAC GGCGCCTTTC CTTTGGGTTC TCTATATCGG GCGGATCGTG GCCGGCATCA CCGGGGCGAC TGGGGCGGTA GCCGGCGCTT ATATTGCCGA TATCACTGAT GGCGATGAGC GCGCGCGGCA CTTCGGCTTC ATGAGCGCCT GTTTCGGGTT CGGGATGGTC GCGGGACCTG TGCTCGGTGG GCTGATGGGC GGTTTCTCCC CCCACGCTCC GTTCTTCGCC GCGGCAGCCT TGAACGGCCT CAATTTCCTG ACGGGCTGTT TCCTTTTGCC GGAGTCGCAC AAAGGCGAAC GCCGGCCGTT ACGCCGGGAG GCTCTCAACC CGCTCGCTTC GTTCCGGTGG GCCCGGGGCA TGACCGTCGT CGCCGCCCTG ATGGCGGTCT TCTTCATCAT GCAACTTGTC GGACAGGTGC CGGCCGCGCT TTGGGTCATT TTCGGCGAGG ATCGCTTTCA CTGGGACGCG ACCACGATCG GCATTTCGCT TGCCGCATTT GGCATTCTGC ATTCACTCGC CCAGGCAATG ATCACCGGCC CTGTAGCCGC CCGGCTCGGC GAAAGGCGGG CACTCATGCT CGGAATGATT GCCGACGGCA CAGGCTACAT CCTGCTTGCC TTCGCGACAC GGGGATGGAT GGCGTTCCCG ATCATGGTCC TGCTTGCTTC GGGTGGCATC GGAATGCCGG CGCTGCAAGC AATGTTGTCC AGGCAGGTGG ATGAGGAACG TCAGGGGCAG CTGCAAGGCT CACTGGCGGC GCTCACCAGC CTGACCTCGA TCGTCGGACC CCTCCTCTTC ACGGCGATCT ATGCGGCTTC TATAACAACG TGGAACGGGT GGGCATGGAT TGCAGGCGCT GCCCTCTACT TGCTCTGCCT GCCGGCGCTG CGTCGCGGGC TTTGGAGCGG CGCAGGGCAA CGAGCCGATC GCTGA
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Protein sequence | MSTNLSVIKN PRVQSDQRRL VRRPDVKPNR PLIVILSTVA LDAVGIGLIM PVLPGLLRDL VHSNDVTAHY GILLALYALM QFACAPVLGA LSDRFGRRPV LLVSLAGAAV DYAIMATAPF LWVLYIGRIV AGITGATGAV AGAYIADITD GDERARHFGF MSACFGFGMV AGPVLGGLMG GFSPHAPFFA AAALNGLNFL TGCFLLPESH KGERRPLRRE ALNPLASFRW ARGMTVVAAL MAVFFIMQLV GQVPAALWVI FGEDRFHWDA TTIGISLAAF GILHSLAQAM ITGPVAARLG ERRALMLGMI ADGTGYILLA FATRGWMAFP IMVLLASGGI GMPALQAMLS RQVDEERQGQ LQGSLAALTS LTSIVGPLLF TAIYAASITT WNGWAWIAGA ALYLLCLPAL RRGLWSGAGQ RADR
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