| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0120 |
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| Symbol | |
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| ID | 6106580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 90229 |
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| End bp | 91242 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641614862 |
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| Product | integrase/recombinase |
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| Protein accession | YP_001740003 |
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| Protein GI | 170650836 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.400978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCG CCACTGCGCC GTTACCACCG CTGCGTTCGG TCAAGGTTCT GGACCAGTTG
CGTGAGCGCA TACGCTACTT GCATTACAGT TTACGAACCG AACAGGCTTA TGTCCACTGG
GTTCGTGCCT TCATCCGTTT CCACGGTGTG CGTCACCCGG CAACCTTGGG CAGCAGCGAA
GTCGAGGCAT TTCTGTCCTG GCTGGCGAAC GAGCGCAAGG TTTCGGTCTC CACGCATCGT
CAGGCATTGG CGGCCTTGCT GTTCTTCTAC GGCAAGGTGC TGTGCACGGA TCTGCCCTGG
CTTCAGGAGA TCGGAAGACC TCGGCCGTCG CGGCGCTTGC CGGTGGTGCT GACCCCGGAT
GAAGTGGTTC GCATCCTCGG TTTTCTGGAA GGCGAGCATC GTTTGTTCGC CCAGCTTCTG
TATGGAACGG GCATGCGGAT CAGTGAGGGT TTGCAACTGC GGGTCAAGGA TCTGGATTTC
GATCACGGCA CGATCATCGT GCGGGAGGGC AAGGGCTCCA AGGATCGGGC CTTGATGTTA
CCCGAGAGCT TGGCACCCAG CCTGCGCGAG CAGCTGTCGC GTGCACGGGC ATGGTGGCTG
AAGGACCAGG CCGAGGGCCG CAGCGGCGTT GCGCTTCCCG ACGCCCTTGA GCGGAAGTAT
CCGCGCGCCG GGCATTCCTG GCCGTGGTTC TGGGTTTTTG CGCAGCACAC GCATTCGACC
GATCCACGGA GCGGTGTCGT GCGTCGCCAT CACATGTATG ACCAGACCTT TCAGCGCGCC
TTCAAACGTG CCGTAGAACA AGCAGGCATC ACGAAGCCCG CCACACCGCA CACCCTCCGC
CACTCGTTCG CGACGGCCTT GCTCCGCAGC GGTTACGACA TTCGAACCGT GCAGGATCTG
CTCGGCCATT CCGACGTCTC TACGACGATG ATTTACACGC ATGTGCTGAA AGTTGGCGGT
GCCGGAGTGC GCTCACCGCT TGATGCGCTG CCGCCCCTCA CTAGTGAGAG GTAG
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| Protein sequence | MKTATAPLPP LRSVKVLDQL RERIRYLHYS LRTEQAYVHW VRAFIRFHGV RHPATLGSSE
VEAFLSWLAN ERKVSVSTHR QALAALLFFY GKVLCTDLPW LQEIGRPRPS RRLPVVLTPD
EVVRILGFLE GEHRLFAQLL YGTGMRISEG LQLRVKDLDF DHGTIIVREG KGSKDRALML
PESLAPSLRE QLSRARAWWL KDQAEGRSGV ALPDALERKY PRAGHSWPWF WVFAQHTHST
DPRSGVVRRH HMYDQTFQRA FKRAVEQAGI TKPATPHTLR HSFATALLRS GYDIRTVQDL
LGHSDVSTTM IYTHVLKVGG AGVRSPLDAL PPLTSER
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