Gene EcSMS35_A0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_A0045 
Symbol 
ID6106480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010488 
Strand
Start bp38102 
End bp38923 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content44% 
IMG OID641614792 
Producthypothetical protein 
Protein accessionYP_001739933 
Protein GI170650799 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTAG CTTCCCGTTT TGGTCGGTAT AATTCCATCC GCCGTGAACG TCCTTTAACG 
GATGATGAAT TAATGCAGTT CGTGCCTTCG GTATTTTCCG GTGATAAACA TGAGTCCCGG
AGTGAACGTT ATACGTATAT TCCAACAATC AATATCATCA ATAAGTTACG TGATGAAGGT
TTCCAGCCAT TCTTTGCCTG TCAGAGTCGG GTTCGTGATT TGGGACGTCG CGAATACAGT
AAACATATGT TACGTCTTCG CAGGGAAGGG CATATTAACG GACAGGAAGT TCCTGAAATT
ATCCTGCTTA ATTCACATGA TGGTTCATCC AGTTATCAGA TGATCCCCGG AATTTTTCGT
TTTGTCTGCA CAAATGGCCT GGTGTGCGGA AATAATTTTG GCGAAATCCG CGTTCCACAT
AAAGGTGATA TTGTCGGGCA GGTTATCGAG GGAGCGTATG AAGTGCTCGG TGTCTTTGAT
AAGGTCACTG ATAATATGGA GGCGATGAAA GAAATTCATC TTAACAGTGA CGAGCAACAT
TTATTTGGCA GAGCTGCACT GATGGTCAGG TATGAAGATG AAAATAAAAC GCCAGTGACA
CCTGAACAGA TAATTACTCC CCGTCGTCGG GAAGACAAAC AGAACGATCT CTGGACAACC
TGGCAGCGGG TTCAGGAGAA TATGATAAAA GGTGGATTAT CGGGGCGAAG TGCCTCCGGG
AAAAATACCA GGACAAGAGC CATTACAGGT ATTGATGGTG ATATAAGAAT CAACAAGGCG
TTATGGGTGA TTGCCGAACA GTTCAGAAAG TGGAAGTCAT GA
 
Protein sequence
MRLASRFGRY NSIRRERPLT DDELMQFVPS VFSGDKHESR SERYTYIPTI NIINKLRDEG 
FQPFFACQSR VRDLGRREYS KHMLRLRREG HINGQEVPEI ILLNSHDGSS SYQMIPGIFR
FVCTNGLVCG NNFGEIRVPH KGDIVGQVIE GAYEVLGVFD KVTDNMEAMK EIHLNSDEQH
LFGRAALMVR YEDENKTPVT PEQIITPRRR EDKQNDLWTT WQRVQENMIK GGLSGRSASG
KNTRTRAITG IDGDIRINKA LWVIAEQFRK WKS