| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0043 |
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| Symbol | |
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| ID | 6106509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | + |
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| Start bp | 37158 |
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| End bp | 37805 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641614790 |
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| Product | lytic transglycosylase |
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| Protein accession | YP_001739931 |
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| Protein GI | 170650864 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCAAA AAGCAAATCA GCAAAAACTT GTTTTTGCGT GGGGTGTGGT GCTTTTGGTG
GTGAGAACCA CCAACCTGTT GAGCCTTTTT GTGGAGTGGG TTAAATTATT TACGGATAAA
GTCACCAGAG GTGGAAAAAT GAAAAAATGG ATGTTAGCCA TCTGCCTGAT GTTTATAAAT
GAGATCTGCC AGGCCACTGA TTGCTTTGAT CTTGCAGGCC GGGATTACAA AATAGATCCT
GATTTACTGA GAGCAATATC ATGGAAAGAA TCCCGTTACC GGGTTAATGC CATCGGTATT
AATCCGGTAA CGGGATATGG CAGCGGACTG ATGCAGGTAG ATTCCCAGCA TTTTAACGAA
CTGGCCCGCT ACGGAATTAA GCCAGAACAT CTGACAACAG ATCCCTGCAT GAACATTTAT
ACCGGTGCTT ATTATCTGGC AATAGCATTT AAAAAATGGG GCGTCACCTG GGAGGCCGTT
GGTGCATACA ATGCAGGATT CAGGAAATCC GAACGCCAGA ACCAGAGACG TCTTGCCTAC
GCATCAGAGG TTTACCGGAT TTATACCGGG ATAAAAAGCA GTAAAGGTAT CCGGCTTCCG
GCCACGAAGA AATCACTTCC GGAAATTAAC AGCGTGCAGA ATAATTAA
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| Protein sequence | MIQKANQQKL VFAWGVVLLV VRTTNLLSLF VEWVKLFTDK VTRGGKMKKW MLAICLMFIN
EICQATDCFD LAGRDYKIDP DLLRAISWKE SRYRVNAIGI NPVTGYGSGL MQVDSQHFNE
LARYGIKPEH LTTDPCMNIY TGAYYLAIAF KKWGVTWEAV GAYNAGFRKS ERQNQRRLAY
ASEVYRIYTG IKSSKGIRLP ATKKSLPEIN SVQNN
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