| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4937 |
|---|
| Symbol | serB |
|---|
| ID | 6144234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 5051782 |
|---|
| End bp | 5052750 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641619740 |
|---|
| Product | phosphoserine phosphatase |
|---|
| Protein accession | YP_001746844 |
|---|
| Protein GI | 170681720 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0560] Phosphoserine phosphatase |
|---|
| TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.859759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAACA TTACCTGGTG CGACCTGCCT GAAGATGTCT CTTTATGGCC TGGTCTGCCT
CTTTCATTAA GTGGTGATGA AGTGATGCCA CTGGATTACC ACGCAGGTCG TAGCGGCTGG
CTGCTGTATG GTCGTGGGCT GGATAAACAA CGTCTGACCC AATACCAGAG CAAACTGGGC
GCGGCTATGG TGATTGTTGC CGCCTGGTGC GTGGAAGATT ATCAGGTGAT TCGTCTGGCA
GGTTCACTCA CCGCGCGGGC TACGCGCCTG GCCCACGAAG CGCAACTGGA TGTCGCGCCG
TTGGGGAAAA TCCCGCACCT GCGCTCTCCG GGTTTGCTGG TGATGGACAT GGATTCCACC
GCCATTCAGA TTGAATGTAT TGACGAAATT GCCAAACTGG CCGGAACCGG CGAGATGGTG
GCGGAGGTAA CCGAACGGGC GATGCGCGGC GAACTCGATT TTACCGCCAG CCTGCGCAGC
CGTGTGGCGA CGCTGAAAGG CGCTGACGCC AATATCCTGC AACAGGTGCG TGAAAATCTG
CCGCTGATGC CAGGCTTAAC GCAACTGGTG CTCAAGCTGG AAACGCTGGG CTGGAAAGTG
GCGATTGCTT CCGGCGGCTT TACTTTCTTT GCTGAATACC TGCGCGACAA GCTGCGCCTG
ACAGCCGTGG TAGCCAATGA ACTGGAGATC ATGGACGGTA AATTTACCGG CAATGTGATC
GGCGACATCG TAGACGCGCA GTACAAAGCG AAAACTCTGA CTCGCCTCGC GCAGGAGTAT
GAAATCCCGC TGGCGCAGAC CGTGGCGATT GGCGATGGAG CCAATGACCT GCCGATGATC
AAAGCGGCAG GGCTGGGGAT TGCCTACCAT GCCAAGCCAA AAGTGAATGA AAAAACGGAA
GTCACCATCC GTCACGCTGA CCTGATGGGG GTATTCTGCA TCCTCTCTGG CAGCCTGAAT
CAGAAGTAA
|
|---|
| Protein sequence | MPNITWCDLP EDVSLWPGLP LSLSGDEVMP LDYHAGRSGW LLYGRGLDKQ RLTQYQSKLG
AAMVIVAAWC VEDYQVIRLA GSLTARATRL AHEAQLDVAP LGKIPHLRSP GLLVMDMDST
AIQIECIDEI AKLAGTGEMV AEVTERAMRG ELDFTASLRS RVATLKGADA NILQQVRENL
PLMPGLTQLV LKLETLGWKV AIASGGFTFF AEYLRDKLRL TAVVANELEI MDGKFTGNVI
GDIVDAQYKA KTLTRLAQEY EIPLAQTVAI GDGANDLPMI KAAGLGIAYH AKPKVNEKTE
VTIRHADLMG VFCILSGSLN QK
|
|---|
| |