Gene EcSMS35_4907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4907 
SymboldnaT 
ID6144954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp5029311 
End bp5029850 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content57% 
IMG OID641619710 
Productprimosomal protein DnaI 
Protein accessionYP_001746817 
Protein GI170681424 
COG category[R] General function prediction only 
COG ID[COG5529] Pyocin large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000108002 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCA GAGTTTTGAC CCCGGACGTC GTTGGTATTG ACGCCCTGGT ACACGATCAC 
CAAACCGTTC TGGCAAAAGC TGAAGGCGGT GTGGTTGCCG TATTTGCTAA CAATGCCCCG
GCGTTTTATG CTGTCACGCC TGCACGCCTG GCTGAACTGC TGGCGCTGGA AGAAAAGCTG
GCGCGTCCGG GAAGCGATGT CGCTCTGGAC GATCAACTCT ATCAGGAACC GCAAGCCGCT
CCCGTTGCTG TACCCATGGG GAAATTCGCC ATGTATCCGG ACTGGCAACC CGATGCCGAC
TTTATCCGCC TGGCGGCGCT ATGGGGCGTG GCGCTAAGAG AGCCGGTGAC CACCGAAGAA
CTGGCCTCAT TCATTGCCTA CTGGCAGGCG GAAGGTAAAG TCTTTCACCA TGTGCAGTGG
CAACAAAAAC TGGCGCGCAG CCTGCAAATC GGCCGTGCCA GCAACGGCGG ACTGCCGAAA
CGAGATGTGA ATACGGTCAG TGAACCTGAC AGCCAAATTC CACCAGGATT CAGAGGGTAA
 
Protein sequence
MSSRVLTPDV VGIDALVHDH QTVLAKAEGG VVAVFANNAP AFYAVTPARL AELLALEEKL 
ARPGSDVALD DQLYQEPQAA PVAVPMGKFA MYPDWQPDAD FIRLAALWGV ALREPVTTEE
LASFIAYWQA EGKVFHHVQW QQKLARSLQI GRASNGGLPK RDVNTVSEPD SQIPPGFRG