| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4881 |
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| Symbol | hgdC |
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| ID | 6144141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4997027 |
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| End bp | 4997794 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641619685 |
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| Product | (R)-2-hydroxyglutaryl-CoA dehydratase activator |
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| Protein accession | YP_001746792 |
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| Protein GI | 170681785 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) |
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| TIGRFAM ID | [TIGR00241] CoA-substrate-specific enzyme activase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.705619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.786718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCATATT CGATTGGCAT TGATTCCGGC TCAACCGCCA CCAAAGGGAT CTTACTGGCA
GACGGCGTGA TTACGCGCCG TTTCCTCGTT CCAACACCCT TTCGCCCGGC AACAGCAATT
ACTGAAGCCT GGGAAACTCT GCGCGAAGGG TTAGAAACAA CGCCGTTTCT GACGCTCACC
GGCTACGGAC GGCAACTGGT GGATTTTGCC GATAAACAGG TGACGGAAAT CTCCTGTCAC
GGGCTGGGCG CACGGTTTCT TGCGCCGGCA ACGCGCGCAG TAATCGACAT CGGTGGTCAG
GACAGCAAAG TGATTCAGCT TGATGATGAC GGTAACCTGT GCGATTTCCT GATGAATGAC
AAATGCGCGG CGGGCACCGG GCGTTTCCTG GAGGTGATCT CGCGCACGCT TGGCACCAGC
GTCGAGCAAC TCGACAGCAT TACTGAAAAT GTCAGACCGC ACGCCATCAC GAGTATGTGC
ACAGTGTTTG CCGAATCAGA AGTGATCAGC CTGCGCTCAG CGGGCGTCGC GCCAGAAGCG
ATTCTCGCTG GAGTGATTAA CGCGATGGCG CGGCGGAGTG CCAATTTCAT TGCTCGTCTC
TCCTGTGAAG CGCCGATTCT GTTTACTGGT GGCGTTAGTC ATTGCCAGAC GTTTGCCCGG
ATGTTGGAAA CTCACCTGGG AATGCCGGTA AATACCCATC CTGATGCGCA ATTTGCTGGC
GCAATTGGCG CAGCGGTAAT TGGTCAACGA GTGAGGACAC GCCGATGA
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| Protein sequence | MAYSIGIDSG STATKGILLA DGVITRRFLV PTPFRPATAI TEAWETLREG LETTPFLTLT
GYGRQLVDFA DKQVTEISCH GLGARFLAPA TRAVIDIGGQ DSKVIQLDDD GNLCDFLMND
KCAAGTGRFL EVISRTLGTS VEQLDSITEN VRPHAITSMC TVFAESEVIS LRSAGVAPEA
ILAGVINAMA RRSANFIARL SCEAPILFTG GVSHCQTFAR MLETHLGMPV NTHPDAQFAG
AIGAAVIGQR VRTRR
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