| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4828 |
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| Symbol | |
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| ID | 6146965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4922866 |
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| End bp | 4925724 |
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| Gene Length | 2859 bp |
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| Protein Length | 952 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641619632 |
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| Product | helicase family protein |
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| Protein accession | YP_001746739 |
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| Protein GI | 170683792 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGC AAAATTATGC ACCTGGTATG CGGGTGGTTA TTCGTGATGC CGAATGGCGT
ATTCGCCGGG CGGATGACAG TGGTGATGGT GGGTATTTGC TGACCTGCGA TGGTATTTCA
GAGCTTGTGC GCGGTAAAGA AGGGTTATTT CTGACCAAAC TGGAACAAAA AGTAGAGATC
CTGGATCCCG CAAAAACGCA TTTGGTGGAA GATGAATCCG CCAATTATCA GGCGGCGCAG
TTGTATATCG AAAGTCAGTT ACGCCAACGC GTACCGACAG ACAGTAAAGT CCATTTTGGT
CATCTGGCGG CGATGGATTC CATGCCGTTT CAGCTCGACC CTACGCGGAT GGCTCTGGCA
CAGCCGCGCC AGCGGATACT CATTGCCGAC GCTGTCGGTC TGGGTAAAAC GCTGGAAGCC
GGTATTCTGG TTTCGGAGCT GATCCGTCGT GGGCGCGGAA AACGTATTCT GGTTCTGGCG
GTTAAATCGA TGCTGACACA ATTCCAGAAG GAGTTCTGGA GCCGTTTTGC GATCCCATTG
ACCCGCCTGG ATTCTGCTGG TTTACAAAAG GTGCGTAACC GCATCCCTAC CAACCACAAC
CCGTTTCACT ATTTTGACAA GACCATTATC TCCATCGATA CGCTGAAACA AGACATTGAA
TATCGTCACC ATCTGGAAAA TGCCTGGTGG GATATTATTG TCATTGATGA GGCCCATAAC
GTCGCAGAAC GTGGAACCAG TTCGTTACGC AGTAAACTGG CAAAACTGCT CGCCGGGCGT
AGCGATACGC TGATTATGCT TTCAGCGACG CCGCATGATG GTAAGGCTGA AAGTTTTGCC
AGCCTGATGA ACATGCTTGA CCCGACGGCG ATCGCCAACC CGAAAGAGTA TGAATACGCC
GACTTTGCCG ATAAAAATCT GGTTGTCCGT CGCTTCAAAA AAGACGTGAA AGATCAGATG
TCCGGCGAGT TCCCCGAGCG CAATATTGTC AAACTGACTC GCCTGGCATC CGGTGCCGAA
GAAGAAGCAT ACCGTCGCCT GGTTGAGAGT CAGTTCCGTG ATGATGACGA TGAACAGGCC
CAGTCTAACA AAGGTCGTCT GTTCAAGATA ACCCTCGAAA AAGCGCTATT TTCCAGCCCG
ATGGCGTGTG CCAGCGTAGT GGCTAATCGT CTGAAGCGTC TTGAGAGCCG TAAAGATCAT
AATAGCCAGA GCCAGATCAA CGAACTGGAG TCATTGCTGT TGGCGCTGAA TAACATTGAT
GCCAGCCAGT TTAGCAAATA CCAGTTGCTG CTCGACACCA TCCGAAAAGA CCTCGCCTGG
AAAGCCAATA ACACGGAAGA TCGCCTGGTG ATCTTCACTG AAAGCATTAA AACGCTGGAG
TTCCTCGAAC AGCAACTGCG AGCGGATCTG AAATTGAAAG ATGATCAGAT CGCCACGCTG
CGCGGCGATC AGGGCGATAC GGTGTTGATG GAAACCGTAG AAGCCTTTGG TAAAACGCAG
TCGCCGTTGC GTCTTCTGGT TTGTTCGGAT GTGGCATCTG AAGGGATCAA CCTGCATCAC
CTTAGCCACA AAATGATTCA CTTTGATATT CCGTGGTCGT TGATGGTATT CCAGCAACGT
AACGGGCGTA TTGACCGCTA TGGGCAAAAA CATCAGCCTC AAATCCGCTA TCTGCTTACC
GAGGCCAGCG AACCGCAGAT CAATGGCGAT ATGCGCGTAC TGGAAGTGTT GATCAACAAA
GACGAACAGG CGCAGAAGAA CATTGGGGAC AGTTCGGAGT TTACCGGCAA ATTTACCCAG
GAAGAGGAAG AAGAGCAGGT TGCAGAGTTC ATGATGCAGG ATGATGGTGC CAGCCTGTTT
GATCAACTGC TGAACAGCAA CGTCTCGGAA AGCGCCGAAC ATGATCTGTT TGGCGAAATA
TGCAGTGCGG TTTCCAGCGA TGCCTCAATG GTCACCGAAA CAGACACCAG CTTGTTTGCC
AGCGAACAGG CGTACTGCGA AAGAGCATTG GGTTACCTGA AAGCCAGTGG TCAAACTATC
CAGTATGAAA CCTTGCCTGA TAATACCTTG TCGCTGGTGG CGCCGGAGGA GTTACGCCGC
CGCTTCAATC AGCTACCGCC TGAAATCGCG CCGGAGAACT GGCAGCTCTA TTTAAGTCAG
GATAAAACCG TCATCACCGA CGCGATTGCA CGCGCTCGCG GTGAGCAACA TGCCTGGCCC
GATGTGCAGT ATCTCTGGCA AATCAACCCG GTAGTGCAGT GGCTGGACGA TAAAATCTCT
TCGGCTTTTG GTCGTCATCA GGCACCGGTT ATCCGTCTGC CATACCTGCT TGAACCCGAT
GAAGATCACT TCATTCTTTC CGGGTTATTC CCGAACCGTA AATCACATCC GATGGTGAAC
CCGTGGATAG TGGTGAGCTT TAACCGTGAA TCGCTAATCG GCAGTCAGCC ATTTGCTGAG
TTTTTACAAC GTCATCCGCA GTTGAGTAAC AAGCTGACTA ACAGCGGCGG TAAAGATCGT
AATCACCAGC GCCAGCAGGA TTTACTGGAA GCGGCTATTG CTCATGCCCG GGAGGTATTC
ATCCATGATC GGAATGCGTT TGAAACGCAC ATTAACCAGC AACTGAATGA GCATCTGCAA
AAGCTGGACG TTTTGCGTGG GCGGCAGTTG AGCCAACTTG AGCTGGATTT TGCCGATAAC
AAACAGCAAT TGTCAGTTAA GCAGAGCCGT AAAGAGCAGA GACAACGCGA AATCGAACAC
AATTTTGACA GCTATATCGA ATGGATTGAG GACACCATGA CGACTGAAAA AGAACCCTAC
ATTCAGGTAA TTGCTGTTAT CACCGGAGCG GAGGGTTAA
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| Protein sequence | MNKQNYAPGM RVVIRDAEWR IRRADDSGDG GYLLTCDGIS ELVRGKEGLF LTKLEQKVEI
LDPAKTHLVE DESANYQAAQ LYIESQLRQR VPTDSKVHFG HLAAMDSMPF QLDPTRMALA
QPRQRILIAD AVGLGKTLEA GILVSELIRR GRGKRILVLA VKSMLTQFQK EFWSRFAIPL
TRLDSAGLQK VRNRIPTNHN PFHYFDKTII SIDTLKQDIE YRHHLENAWW DIIVIDEAHN
VAERGTSSLR SKLAKLLAGR SDTLIMLSAT PHDGKAESFA SLMNMLDPTA IANPKEYEYA
DFADKNLVVR RFKKDVKDQM SGEFPERNIV KLTRLASGAE EEAYRRLVES QFRDDDDEQA
QSNKGRLFKI TLEKALFSSP MACASVVANR LKRLESRKDH NSQSQINELE SLLLALNNID
ASQFSKYQLL LDTIRKDLAW KANNTEDRLV IFTESIKTLE FLEQQLRADL KLKDDQIATL
RGDQGDTVLM ETVEAFGKTQ SPLRLLVCSD VASEGINLHH LSHKMIHFDI PWSLMVFQQR
NGRIDRYGQK HQPQIRYLLT EASEPQINGD MRVLEVLINK DEQAQKNIGD SSEFTGKFTQ
EEEEEQVAEF MMQDDGASLF DQLLNSNVSE SAEHDLFGEI CSAVSSDASM VTETDTSLFA
SEQAYCERAL GYLKASGQTI QYETLPDNTL SLVAPEELRR RFNQLPPEIA PENWQLYLSQ
DKTVITDAIA RARGEQHAWP DVQYLWQINP VVQWLDDKIS SAFGRHQAPV IRLPYLLEPD
EDHFILSGLF PNRKSHPMVN PWIVVSFNRE SLIGSQPFAE FLQRHPQLSN KLTNSGGKDR
NHQRQQDLLE AAIAHAREVF IHDRNAFETH INQQLNEHLQ KLDVLRGRQL SQLELDFADN
KQQLSVKQSR KEQRQREIEH NFDSYIEWIE DTMTTEKEPY IQVIAVITGA EG
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