Gene EcSMS35_4804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4804 
Symbol 
ID6147010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4892234 
End bp4892710 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content59% 
IMG OID641619611 
ProductRadC family DNA repair protein 
Protein accessionYP_001746718 
Protein GI170680679 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGC TTTCCTTTCT GCCCGGAGAG ATGACGCCCG GCGAGCGCAG CCTCATTCAG 
CGGGCCCTGA AAACCCTGGA CCGCCATCTT CATGAACCCG GCGTGGCCTT CACCTCCACG
CATGCGGCAC GGGAATGGCT GATTCTGAAC ATGGCAGGAC TGGAGCGGGA AGAGTTCCGG
GTGCTGTATC TGAACAACCA GAATCAGCTG ATTGCGGGTG AAACCCTCTT CACAGGCACC
ATCAACCGCA CAGAAGTCCA TCCCCGGGAG GTGATTAAAC GTGCCCTGTA CCACAATGCC
GCTGCCGTGG TGCTGGCGCA CAATCACCCG TCCGGTGAAG TCACCCCCAG TAAGGCAGAC
CGGCTTATCA CTGAACGTCT GGTACAGGCG CTGGCCCTGG TGGATATCCG GGTGCCGGAC
CATCTGATAG TCGGTGGCAG CCAGGTATTC TCCTTTGCCG AACACGGTCT GCTTTAA
 
Protein sequence
MQQLSFLPGE MTPGERSLIQ RALKTLDRHL HEPGVAFTST HAAREWLILN MAGLEREEFR 
VLYLNNQNQL IAGETLFTGT INRTEVHPRE VIKRALYHNA AAVVLAHNHP SGEVTPSKAD
RLITERLVQA LALVDIRVPD HLIVGGSQVF SFAEHGLL