Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4724 |
Symbol | |
ID | 6142916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4825747 |
End bp | 4826172 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641619540 |
Product | putative endoribonuclease L-PSP |
Protein accession | YP_001746648 |
Protein GI | 170684125 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA CTTTTTACCG CTGTAATAAA GGAGAAATCA TGAGCAAAAC TATCGCGACG GAAAATGCAC CGGCAGCTAT CGGTCCTTAC GTGCAGGGCG TTGATCTGGG CAATATGATT ATCACTTCCG GTCAGATCCC GGTAAACCCG AAAACGGGTG AAGTACCGGC AGACGTCGCT GCACAGGCAC GTCAGTCGCT GGATAACGTA AAAGCGATCG TCGAAGCCGC TGGCCTGAAA GTGGGCGATA TCGTTAAAAC CACCGTGTTT GTGAAAGATC TGAACGACTT CGCAACCGTT AATGCTACCT ACGAAGCCTT CTTCACCGAA CACAACGCCA CCTTCCCGGC ACGTTCTTGC GTTGAAGTAG CCCGTCTGCC GAAAGACGTG AAGATTGAGA TCGAAGCGAT CGCTGTTCGT CGCTAA
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Protein sequence | MSQTFYRCNK GEIMSKTIAT ENAPAAIGPY VQGVDLGNMI ITSGQIPVNP KTGEVPADVA AQARQSLDNV KAIVEAAGLK VGDIVKTTVF VKDLNDFATV NATYEAFFTE HNATFPARSC VEVARLPKDV KIEIEAIAVR R
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