| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4721 |
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| Symbol | treB |
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| ID | 6146907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4819979 |
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| End bp | 4821400 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641619537 |
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| Product | PTS system trehalose(maltose)-specific transporter subunits IIBC |
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| Protein accession | YP_001746645 |
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| Protein GI | 170682939 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component
[TIGR01992] PTS system, trehalose-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.612827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGCA AAATAAACCA AACGGATATC GATCGGTTGA TTGAACTGGT CGGCGGGCGC
GGCAATATTG CGACGGTGAG CCACTGTATT ACTCGTCTGC GCTTTGTCCT CAACCAACCG
GCCAATGCCA GACCGAAAGA AATTGAGCAA CTCCCCATGG TGAAAGGCTG TTTCACCAAT
GCCGGGCAAT TTCAGGTGGT GATTGGCACC AACGTGGGTG ATTACTATCA AGCACTGATT
GCGTCAACCG GACAGGCGCA GGTTGATAAA GAGCAGGTAA AAAAAGCCGC CCGGCAGAAT
ATGAAATGGC ATGAGCAGTT GATCTCTCAT TTCGCGGAGA TCTTCTTCCC GTTGCTGCCC
GCGTTGATTA GTGGTGGTTT GATCCTCGGT TTTCGCAATG TGATCGGCGA TTTGCCCATG
AGCAACGGTC AAACGCTGGC GCAAATGTAC CCTTCCCTAC AAACGATCTA CGATTTTCTA
TGGTTGATCG GTGAAGCGAT CTTCTTCTAC TTGCCGGTCG GGATTTGCTG GTCAGCGGTG
AAAAAAATGG GCGGTACACC GATCCTCGGT ATCGTGCTTG GCGTGACACT GGTTTCTCCA
CAGCTGATGA ACGCTTATCT GCTCGGGCAG CAGCTGCCGG AAGTGTGGGA CTTTGGCATG
TTCAGCATCG CTAAAGTGGG CTATCAGGCG CAGGTGATCC CGGCACTGTT AGCCGGGTTG
GCGCTGGGCG TTATTGAAAC TCGCCTTAAA CGCATCGTAC CGGATTACCT CTATCTGGTG
GTGGTGCCCG TCTGTTCGCT GATCCTCGCG GTGTTCCTCG CCCATGCGCT GATTGGTCCG
TTTGGTCGCA TGATTGGCGA TGGCGTTGCC TTTGCGGTAC GTCACCTGAT GACCGGCAGC
TTTGCTCCGA TTGGCGCGGC ATTGTTTGGC TTCCTGTACG CCCCGCTGGT GATCACCGGC
GTACACCAGA CCACGCTTGC TATTGATTTG CAGATGATTC AAAGCATGGG TGGCACGCCA
GTGTGGCCGC TGATTGCGCT GTCGAATATC GCTCAGGGCT CCGCTGTGAT AGGTATTATC
ATTTCCAGCC GCAAGCACAA TGAACGCGAG ATCTCCGTGC CTGCGGCGAT CTCCGCCTGG
CTTGGGGTCA CTGAGCCTGC AATGTACGGC ATCAACCTGA AATATCGCTT CCCGATGCTG
TGCGCGATGA TTGGTTCTGG TCTGGCAGGA TTGCTATGCG GCCTGAACGG CGTTATGGCG
AATGGCATCG GCGTAGGCGG CCTGCCGGGA ATTCTCTCGA TTCAACCGAG CTACTGGCAG
GTGTTTGCGC TGGCAATGGC TATCGCCATC ATCATCCCGA TTGTACTCAC CTCGTTTATC
TATCAGCGGA AATACCGCCT GGGCACGCTG GACATTGTTT AA
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| Protein sequence | MMSKINQTDI DRLIELVGGR GNIATVSHCI TRLRFVLNQP ANARPKEIEQ LPMVKGCFTN
AGQFQVVIGT NVGDYYQALI ASTGQAQVDK EQVKKAARQN MKWHEQLISH FAEIFFPLLP
ALISGGLILG FRNVIGDLPM SNGQTLAQMY PSLQTIYDFL WLIGEAIFFY LPVGICWSAV
KKMGGTPILG IVLGVTLVSP QLMNAYLLGQ QLPEVWDFGM FSIAKVGYQA QVIPALLAGL
ALGVIETRLK RIVPDYLYLV VVPVCSLILA VFLAHALIGP FGRMIGDGVA FAVRHLMTGS
FAPIGAALFG FLYAPLVITG VHQTTLAIDL QMIQSMGGTP VWPLIALSNI AQGSAVIGII
ISSRKHNERE ISVPAAISAW LGVTEPAMYG INLKYRFPML CAMIGSGLAG LLCGLNGVMA
NGIGVGGLPG ILSIQPSYWQ VFALAMAIAI IIPIVLTSFI YQRKYRLGTL DIV
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