| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4720 |
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| Symbol | treC |
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| ID | 6147116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4818274 |
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| End bp | 4819929 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641619536 |
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| Product | trehalose-6-phosphate hydrolase |
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| Protein accession | YP_001746644 |
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| Protein GI | 170682699 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02403] alpha,alpha-phosphotrehalase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.782883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCATC TTCCCCACTG GTGGCAAAAC GGCGTTATCT ACCAGATTTA TCCAAAGAGT
TTTCAGGACA CCACGGGTAG CGGCACCGGC GATTTACGTG GCGTTATCCA GCGCCTGGAC
TATCTGCATA AACTGGGCGT TGATGCCATC TGGCTAACCC CCTTTTATGT CTCTCCCCAG
GTCGATAACG GTTACGACGT AGCAAATTAT ACGGCGATTG ATCCCACCTA TGGCACGCTG
GACGATTTTG ACGAACTGGT GACACAGGCA AAATCGCGTG GGATTCGTAT CATTCTCGAT
ATGGTGTTTA ACCATACCTC TACCCAACAT GCCTGGTTTC GCGAGGCGCT GAACAAAGAA
AGCCCTTACC GCCAGTTTTA TATCTGGCGC GATGGAGAAC CAGAAACGCC ACCGAACAAC
TGGCGTTCAA AATTCGGTGG TAGTGCGTGG CGCTGGCATG CGGAAAGCGA ACAGTACTAT
TTGCATCTCT TTGCACCAGA ACAGGCGGAT CTCAACTGGG AGAATCCAGC GGTACGCGCA
GAGCTGAAAA AAGTCTGTGA GTTCTGGGCC AATCGTGGGG TCGACGGGTT GCGCCTGGAT
GTGGTGAATC TGATCTCCAA AGATCCGCGT TACCCTGAAG ACCTGGATGG CGACGGGCGT
CGCTTCTACA CCGACGGGCC ACGAGCACAC GAGTTTTTGC ACGAGATGAA CCGCGATGTG
TTTACGCCAC ACGGGTTAAT GACCGTAGGT GAAATGTCCT CCACCAGCCT TGAGCATTGC
CAGCGATACG CGGCACTGAC AGGCAGTGAA TTGTCGATGA CCTTTAATTT TCATCACCTG
AAGGTCGATT ATCCCGGTGG TGAGAAATGG ACGCTGGCTA AACCTGACTT TGTGGCGTTG
AAAACATTGT TCCGCCACTG GCAACAAGGA ATGCACAACG TGGCATGGAA TGCCTTGTTC
TGGTGTAACC ACGATCAGCC GCGCATTGTT TCTCGCTTTG GTGATGAAGG TGAATACCGC
GTGCCTGCGG CAAAAATGCT GGCGATGGTG CTGCATGGCA TGCAGGGAAC GCCGTATATC
TACCAGGGCG AAGAGATTGG CATGACCAAC CCACATTTCA CGCGCATTAC TGACTATCGC
GACGTGGAGA GCCTCAATAT GTTTGCCGAG CTGCGCAACG ATGGTCGTGA TGCCGACGAG
TTATTGGCAA TCCTCGCCAG TAAATCCCGT GACAACAGTC GCACACCCAT GCAATGGACC
AACGGCGATA ATGCCGGGTT TACGGCTGGC GAACCGTGGA TTGGCCTGGG CGATAACTAT
CAGGAAATCA ACGTAGAAGC AGCGCTGGCC GATGAGTCCT CGGTGTTTTA CACCTACCAA
AAGTTAATCG CACTGCGTAA GCAAGAAGCC GTCCTGACAT GGGGCGATTA CCAGGATCTG
CTGCCAAACA GCCCTGTATT GTGGTGCTAT CGCCGTGAGT GGAAGGGGCA AACCTTGCTG
GTCATTGCCA ACCTTAGCCG TGAGACCCAA CCCTGGCAGC CAGGGAAAAT GCTCGGCAAC
TGGCAGCTTG TGATGCATAA CTACGAAGAA GCCTCACCAC AACCCTGTGC CATGACTTTA
CGGCCTTTTG AGGCTGTCTG GTGGTTACAG AAGTAA
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| Protein sequence | MTHLPHWWQN GVIYQIYPKS FQDTTGSGTG DLRGVIQRLD YLHKLGVDAI WLTPFYVSPQ
VDNGYDVANY TAIDPTYGTL DDFDELVTQA KSRGIRIILD MVFNHTSTQH AWFREALNKE
SPYRQFYIWR DGEPETPPNN WRSKFGGSAW RWHAESEQYY LHLFAPEQAD LNWENPAVRA
ELKKVCEFWA NRGVDGLRLD VVNLISKDPR YPEDLDGDGR RFYTDGPRAH EFLHEMNRDV
FTPHGLMTVG EMSSTSLEHC QRYAALTGSE LSMTFNFHHL KVDYPGGEKW TLAKPDFVAL
KTLFRHWQQG MHNVAWNALF WCNHDQPRIV SRFGDEGEYR VPAAKMLAMV LHGMQGTPYI
YQGEEIGMTN PHFTRITDYR DVESLNMFAE LRNDGRDADE LLAILASKSR DNSRTPMQWT
NGDNAGFTAG EPWIGLGDNY QEINVEAALA DESSVFYTYQ KLIALRKQEA VLTWGDYQDL
LPNSPVLWCY RREWKGQTLL VIANLSRETQ PWQPGKMLGN WQLVMHNYEE ASPQPCAMTL
RPFEAVWWLQ K
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