Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4604 |
Symbol | |
ID | 6143659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4707700 |
End bp | 4708275 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641619420 |
Product | putative transcriptional regulator |
Protein accession | YP_001746531 |
Protein GI | 170679619 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000800065 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.777869 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAACGTG AAGATGTACT GGGAGAAGCC CTGAAATTAT TAGAATTACA AGGGATTGCC AACACCACGC TGGAGATGGT TGCTGAACGT GTGGATTATC CACTGGACGA GCTGCGCCGC TTCTGGCCAG ACAAAGAGGC AATCCTCTAC GATGCGCTGC GTTATCTTAG CCAACAGATA GATGCCTGGC GTCGTCAGCT GATGCTGGAC GAAACGCAAA CCGCCGAACA AAAGTTGCTG GCACGTTATC AGGCGTTATC GGAGTGCGTT AAAAACAACC GCTATCCGGG CTGTCTGTTT ATCGCTGCCT GTACGTTTTA TCCCGATCCT GGCCACCCTA TTCATCAACT AGCCGATCAG CAAAAAAGCG CGGCCTACGA TTTCACCCAC GAACTGTTAA CCACGCTGGA AGTTGACGAT CCGGCGATGG TAGCAAAGCA GATGGAACTG GTGCTGGAAG GCTGTTTAAG CCGAATGCTG GTGAATCGTA GCCAGGCGGA TGTCGACACC GCACATCGGC TGGCGGAAGA TATCCTGCGC TTCGCCCGCT GCCGCCAGGG TGGCGCACTG ACCTGA
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Protein sequence | MQREDVLGEA LKLLELQGIA NTTLEMVAER VDYPLDELRR FWPDKEAILY DALRYLSQQI DAWRRQLMLD ETQTAEQKLL ARYQALSECV KNNRYPGCLF IAACTFYPDP GHPIHQLADQ QKSAAYDFTH ELLTTLEVDD PAMVAKQMEL VLEGCLSRML VNRSQADVDT AHRLAEDILR FARCRQGGAL T
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