| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4598 |
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| Symbol | lysU |
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| ID | 6146751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4698166 |
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| End bp | 4699683 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641619414 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001746526 |
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| Protein GI | 170682016 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.221304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAC GAGAAACACG GGGAGCCAAT GAGGCTATTG ATTTTAACGA TGAACTGAGA
AATCGCCGCG AAAAACTGGC GGCACTACGT CAGCAAGGTG TGGCGTTTCC CAATGATTTT
CGCCGCGACC ATACCTCTGA CCAGTTGCAC GACGAGTTTG ATGCGAAGGA TAACCAGGAA
CTGGAATCCT TAAACATTGA AGTCTCGGTT GCTGGCCGAA TGATGACCCG TCGTATTATG
GGGAAAGCCT CCTTTGTAAC GTTGCAGGAT GTCGGTGGCC GTATTCAACT GTACGTTGCA
AGAGATAGCC TGCCAGAAGG TGTTTATAAC GATCAGTTTA AAAAATGGGA TCTGGGTGAC
ATTATCGGTG CCCGCGGTAC GCTGTTTAAG ACGCAAACGG GTGAGCTTTC CATTCACTGT
ACTGAGCTGC GCCTGCTGAC TAAAGCACTA CGTCCTTTAC CAGATAAATT CCATGGTCTG
CAGGATCAGG AAGTCCGTTA TCGTCAACGT TATCTGGACC TCATCGCTAA CGATAAATCC
CGTCAAACGT TTGTTGTCCG TTCAAAAATT CTGGCCGCTA TCCGTCAGTT CATGGTCGCG
CGCGGCTTTA TGGAAGTAGA AACCCCGATG ATGCAGGTAA TTCCAGGTGG GGCATCTGCT
CGCCCGTTTA TTACCCATCA TAACGCTCTG GATTTAGATA TGTACCTGCG TATCGCGCCG
GAGCTGTATC TGAAACGTCT GGTTGTAGGC GGTTTTGAAC GGGTATTCGA AATCAACCGT
AACTTCCGTA ATGAAGGTAT TTCTGTTCGC CATAATCCTG AGTTCACAAT GATGGAACTC
TACATGGCAT ATGCGGATTA CCATGATTTG ATTGAACTGA CGGAGTCACT GTTCCGCACC
CTGGCACAAG AGGTACTGGG TACCACTAAA GTCACTTATG GCGAGCATGT GTTTGATTTC
GGCAAACCGT TTGAAAAACT CACCATGCGC GAAGCAATCA AAAAATATCG TCCAGAAACC
GATATGGCGG ATCTGGATAA TTTTGATGCT GCTAAAGCAT TAGCTGAATC TATCGGAATT
ACGGTAGAGA AAAGCTGGGG GCTGGGACGT ATTGTCACAG AGATCTTTGA TGAAGTGGCA
GAAGCACATC TGATTCAGCC AACCTTTATT ACGGAATATC CGGCAGAAGT GTCCCCGCTG
GCGCGCCGTA ATGATGTTAA CCCGGAAATC ACCGACCGTT TTGAATTCTT CATCGGTGGT
CGTGAAATTG GTAATGGTTT TAGCGAATTA AACGACGCAG AAGATCAGGC TGAACGTTTC
CAGGAACAGG TTAACGCTAA AGCTGCAGGT GACGACGAAG CCATGTTCTA TGACGAAGAT
TACGTGACTG CGCTGGAATA TGGTCTGCCG CCAACCGCTG GTCTGGGTAT TGGTATCGAC
CGAATGATTA TGCTGTTTAC TAACAGCCAT ACTATTCGCG ACGTTATTCT CTTCCCGGCG
ATGCGCCCAC AGAAATAA
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| Protein sequence | MSERETRGAN EAIDFNDELR NRREKLAALR QQGVAFPNDF RRDHTSDQLH DEFDAKDNQE
LESLNIEVSV AGRMMTRRIM GKASFVTLQD VGGRIQLYVA RDSLPEGVYN DQFKKWDLGD
IIGARGTLFK TQTGELSIHC TELRLLTKAL RPLPDKFHGL QDQEVRYRQR YLDLIANDKS
RQTFVVRSKI LAAIRQFMVA RGFMEVETPM MQVIPGGASA RPFITHHNAL DLDMYLRIAP
ELYLKRLVVG GFERVFEINR NFRNEGISVR HNPEFTMMEL YMAYADYHDL IELTESLFRT
LAQEVLGTTK VTYGEHVFDF GKPFEKLTMR EAIKKYRPET DMADLDNFDA AKALAESIGI
TVEKSWGLGR IVTEIFDEVA EAHLIQPTFI TEYPAEVSPL ARRNDVNPEI TDRFEFFIGG
REIGNGFSEL NDAEDQAERF QEQVNAKAAG DDEAMFYDED YVTALEYGLP PTAGLGIGID
RMIMLFTNSH TIRDVILFPA MRPQK
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