Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4529 |
Symbol | actP |
ID | 6146251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4629297 |
End bp | 4630946 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641619345 |
Product | acetate permease |
Protein accession | YP_001746457 |
Protein GI | 170682571 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02711] cation/acetate symporter ActP |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAG TTCTGACGGC GCTTGCCGCC ACACTCCCTT TCGCAGCTAA CGCCGCGGAT GCTATTAGCG GGGCCGTAGA GCGCCAGCCA ACAAACTGGC AGGCGATTAT TATGTTCCTG ATTTTCGTCG TGTTTACGCT CGGCATTACC TACTGGGCGT CAAAACGCGT ACGTTCGCGT AATGACTACT ACACCGCAGG CGGCAATATC ACCGGTTTTC AGAACGGGCT GGCGATTGCC GGGGACTATA TGTCCGCCGC CTCATTCTTG GGGATCTCCG CGCTGGTGTT TACCTCCGGC TATGACGGGC TGATCTACTC GTTGGGCTTC CTGGTGGGCT GGCCAATCAT TCTGTTCCTG ATTGCCGAAC GTCTGCGTAA CCTCGGTCGC TACACCTTTG CCGATGTGGC CTCTTACCGT CTGAAACAAG GGCCGATTCG TATTCTTTCG GCCTGTGGTT CTCTGGTGGT GGTGGCGCTT TACCTTATCG CCCAGATGGT AGGTGCAGGT AAACTCATCG AGCTGCTGTT TGGCCTTAAC TATCACATTG CGGTGGTGCT GGTCGGCGTG CTGATGATGA TGTACGTCCT GTTCGGCGGC ATGCTGGCGA CCACCTGGGT ACAGATTATC AAAGCCGTTC TGTTGCTGTT CGGTGCCAGC TTTATGGCCT TTATGGTGAT GAAACACGTC GGCTTTAGCT TCAACAATCT GTTCAGCGAA GCGATGGCGG TACACCCGAA AGGTGTCGAC ATCATGAAGC CGGGCGGGCT GGTGAAAGAT CCTATCTCCG CGCTCTCTTT GGGGCTAGGA CTGATGTTTG GTACGGCTGG CTTGCCGCAT ATTCTGATGC GCTTCTTTAC GGTCAGCGAT GCCCGCGAAG CACGTAAGAG CGTGTTCTAC GCCACCGGAT TTATGGGCTA CTTCTACATC CTGACCTTTA TTATCGGCTT CGGCGCAATC ATGCTGGTTG GTGCGAATCC GGAATATAAA GACGCGGCGG GCCATCTGAT TGGTGGTAAC AACATGGCAG CAGTTCACCT GGCGAATGCA GTGGGTGGCA ACCTGTTCCT CGGCTTTATT TCAGCGGTTG CTTTCGCCAC CATTCTTGCG GTGGTTGCGG GTCTGACGCT GGCGGGCGCA TCGGCGGTGT CTCACGACCT GTACGCTAAC GTCTTCAAAA AAGGTGCGAC CGAACGTGAA GAGCTGCGGG TATCGAAAAT CACCGTACTG ATCCTCGGTG TGATTGCCAT TATCCTCGGC GTGCTGTTTG AGAATCAGAA CATCGCCTTT ATGGTGGGGC TGGCGTTTGC CATCGCGGCG AGCTGTAACT TCCCGATCAT TCTGCTTTCC ATGTACTGGT CGAAACTGAC TACCCGTGGC GCGATGCTGG GCGGCTGGTT AGGACTGATT ACTGCGGTGG TGCTGATGAT CCTCGGCCCG ACGATTTGGG TACAGATCCT CGGTCACGAA AAAGCCATCT TCCCGTATGA ATACCCGGCG CTGTTCTCTA TCAGCGTGGC ATTCCTCGGC ATCTGGTTCT TCTCGGCAAC CGATAACTCA GCGGAAGGCG CGCGTGAGCG TGAACTGTTC CGTGCGCAGT TTATCCGTTC CCAGACCGGC TTTGGCGTTG AGCAAGGCCG CGCGCATTAA
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Protein sequence | MKRVLTALAA TLPFAANAAD AISGAVERQP TNWQAIIMFL IFVVFTLGIT YWASKRVRSR NDYYTAGGNI TGFQNGLAIA GDYMSAASFL GISALVFTSG YDGLIYSLGF LVGWPIILFL IAERLRNLGR YTFADVASYR LKQGPIRILS ACGSLVVVAL YLIAQMVGAG KLIELLFGLN YHIAVVLVGV LMMMYVLFGG MLATTWVQII KAVLLLFGAS FMAFMVMKHV GFSFNNLFSE AMAVHPKGVD IMKPGGLVKD PISALSLGLG LMFGTAGLPH ILMRFFTVSD AREARKSVFY ATGFMGYFYI LTFIIGFGAI MLVGANPEYK DAAGHLIGGN NMAAVHLANA VGGNLFLGFI SAVAFATILA VVAGLTLAGA SAVSHDLYAN VFKKGATERE ELRVSKITVL ILGVIAIILG VLFENQNIAF MVGLAFAIAA SCNFPIILLS MYWSKLTTRG AMLGGWLGLI TAVVLMILGP TIWVQILGHE KAIFPYEYPA LFSISVAFLG IWFFSATDNS AEGARERELF RAQFIRSQTG FGVEQGRAH
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