Gene EcSMS35_4471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4471 
SymboliclR 
ID6144090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4565707 
End bp4566531 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content54% 
IMG OID641619287 
Producttranscriptional repressor IclR 
Protein accessionYP_001746399 
Protein GI170683355 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.215784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0860899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCAC CCATTCCCGC GAAACGCGGC AGAAAACCCG CCGTTGCCAC CGCACCAGCG 
ACTGGACAGG TTCAGTCTTT AACGCGTGGC CTGAAATTAC TGGAGTGGAT TGCCGAATCC
AATGGCAGTG TGGCACTCAC GGAGCTGGCG CAACAAGCCG GGTTACCCAA TTCCACGACC
CACCGCCTGC TAACCACGAT GCAACAGCAG GGTTTCGTGC GTCAGGTTGG CGAACTGGGA
CACTGGGCAA TCGGCGCACA TGCCTTTATG GTCGGCAGCA GCTTTCTCCA GAGCCGTAAT
TTGTTAGCAA TTGTTCACCC TATCCTGCGC AATCTAATGG AAGAGTCTGG CGAAACGGTC
AATATGGCGG TGCTTGATCA AAGCGATCAT GAAGCGATTA TTATCGACCA GGTACAGTGT
ACCCACCTGA TGCGAATGTC CGCGCCTATC GGCGGTAAAT TACCTATGCA CGCTTCCGGT
GCGGGTAAAG CCTTTTTAGC CCAACTGAGC GAAGAACAGG TGACGAAGCT GCTGCACCGC
AAAGGGTTAC ATGCCTATAC CCACGCAACG CTAGTGTCTC CTGTGCATTT AAAAGAAGAT
CTCGCCCAAA CGCGCAAACG GGGTTATTCA TTTGACGATG AGGAACATGC GCTGGGGCTA
CGTTGCCTTG CAGCGTGTAT TTTCGATGAG CACCGTGAAC CGTTTGCCGC AATTTCTATT
TCCGGACCGA TTTCACGTAT TACCGATGAC CGCGTGACCG AGTTTGGCGC GATGGTGATT
AAAGCGGCGA AGGAAGTGAC GCTGGCGTAC GGTGGAATGC GCTGA
 
Protein sequence
MVAPIPAKRG RKPAVATAPA TGQVQSLTRG LKLLEWIAES NGSVALTELA QQAGLPNSTT 
HRLLTTMQQQ GFVRQVGELG HWAIGAHAFM VGSSFLQSRN LLAIVHPILR NLMEESGETV
NMAVLDQSDH EAIIIDQVQC THLMRMSAPI GGKLPMHASG AGKAFLAQLS EEQVTKLLHR
KGLHAYTHAT LVSPVHLKED LAQTRKRGYS FDDEEHALGL RCLAACIFDE HREPFAAISI
SGPISRITDD RVTEFGAMVI KAAKEVTLAY GGMR