Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4471 |
Symbol | iclR |
ID | 6144090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4565707 |
End bp | 4566531 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641619287 |
Product | transcriptional repressor IclR |
Protein accession | YP_001746399 |
Protein GI | 170683355 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.215784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.0860899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGCAC CCATTCCCGC GAAACGCGGC AGAAAACCCG CCGTTGCCAC CGCACCAGCG ACTGGACAGG TTCAGTCTTT AACGCGTGGC CTGAAATTAC TGGAGTGGAT TGCCGAATCC AATGGCAGTG TGGCACTCAC GGAGCTGGCG CAACAAGCCG GGTTACCCAA TTCCACGACC CACCGCCTGC TAACCACGAT GCAACAGCAG GGTTTCGTGC GTCAGGTTGG CGAACTGGGA CACTGGGCAA TCGGCGCACA TGCCTTTATG GTCGGCAGCA GCTTTCTCCA GAGCCGTAAT TTGTTAGCAA TTGTTCACCC TATCCTGCGC AATCTAATGG AAGAGTCTGG CGAAACGGTC AATATGGCGG TGCTTGATCA AAGCGATCAT GAAGCGATTA TTATCGACCA GGTACAGTGT ACCCACCTGA TGCGAATGTC CGCGCCTATC GGCGGTAAAT TACCTATGCA CGCTTCCGGT GCGGGTAAAG CCTTTTTAGC CCAACTGAGC GAAGAACAGG TGACGAAGCT GCTGCACCGC AAAGGGTTAC ATGCCTATAC CCACGCAACG CTAGTGTCTC CTGTGCATTT AAAAGAAGAT CTCGCCCAAA CGCGCAAACG GGGTTATTCA TTTGACGATG AGGAACATGC GCTGGGGCTA CGTTGCCTTG CAGCGTGTAT TTTCGATGAG CACCGTGAAC CGTTTGCCGC AATTTCTATT TCCGGACCGA TTTCACGTAT TACCGATGAC CGCGTGACCG AGTTTGGCGC GATGGTGATT AAAGCGGCGA AGGAAGTGAC GCTGGCGTAC GGTGGAATGC GCTGA
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Protein sequence | MVAPIPAKRG RKPAVATAPA TGQVQSLTRG LKLLEWIAES NGSVALTELA QQAGLPNSTT HRLLTTMQQQ GFVRQVGELG HWAIGAHAFM VGSSFLQSRN LLAIVHPILR NLMEESGETV NMAVLDQSDH EAIIIDQVQC THLMRMSAPI GGKLPMHASG AGKAFLAQLS EEQVTKLLHR KGLHAYTHAT LVSPVHLKED LAQTRKRGYS FDDEEHALGL RCLAACIFDE HREPFAAISI SGPISRITDD RVTEFGAMVI KAAKEVTLAY GGMR
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