| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4431 |
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| Symbol | rplK |
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| ID | 6147034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4524019 |
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| End bp | 4524447 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641619251 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_001746367 |
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| Protein GI | 170681035 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000394212 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00000226734 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTAAGA AAGTACAAGC CTATGTCAAG CTGCAGGTTG CAGCTGGTAT GGCTAACCCG
AGTCCGCCAG TAGGTCCGGC TCTGGGTCAG CAGGGCGTAA ACATCATGGA ATTCTGCAAA
GCGTTCAACG CAAAAACTGA TTCCATCGAA AAAGGTCTGC CGATTCCGGT AGTAATCACC
GTTTACGCTG ACCGTTCTTT CACTTTCGTT ACCAAGACTC CGCCAGCAGC AGTTCTGCTG
AAAAAAGCGG CTGGTATCAA GTCTGGTTCC GGTAAGCCGA ACAAAGACAA AGTGGGTAAA
ATTTCCCGCG CTCAGCTGCA GGAAATCGCG CAGACCAAAG CTGCCGACAT GACTGGTGCC
GACATTGAAG CGATGACTCG CTCCATCGAA GGTACTGCAC GTTCCATGGG CCTGGTAGTG
GAGGACTAA
|
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| Protein sequence | MAKKVQAYVK LQVAAGMANP SPPVGPALGQ QGVNIMEFCK AFNAKTDSIE KGLPIPVVIT
VYADRSFTFV TKTPPAAVLL KKAAGIKSGS GKPNKDKVGK ISRAQLQEIA QTKAADMTGA
DIEAMTRSIE GTARSMGLVV ED
|
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