Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4378 |
Symbol | rpmE |
ID | 6146133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4465878 |
End bp | 4466090 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641619199 |
Product | 50S ribosomal protein L31 |
Protein accession | YP_001746323 |
Protein GI | 170680515 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0254] Ribosomal protein L31 |
TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.427206 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG ATATTCACCC GAAATACGAA GAAATTACTG CTAGCTGCTC TTGCGGTAAC GTAATGAAAA TCCGCTCCAC CGTTGGTCAT GACCTGAACC TCGACGTGTG CAGCAAGTGC CACCCGTTCT TCACTGGCAA ACAGCGTGAT GTTGCTACCG GTGGCCGTGT TGACCGCTTC AACAAGCGTT TCAACATCCC GGGCAGCAAA TAA
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Protein sequence | MKKDIHPKYE EITASCSCGN VMKIRSTVGH DLNLDVCSKC HPFFTGKQRD VATGGRVDRF NKRFNIPGSK
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