| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4377 |
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| Symbol | priA |
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| ID | 6145623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4463477 |
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| End bp | 4465675 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641619198 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_001746322 |
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| Protein GI | 170681937 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.679343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTTG CCCACGTTGC CTTGCCCGTT CCGCTTCCTC GTACCTTTGA CTATCTGCTG
CCAGAAGGCA TGACGGTTAA AGCCGGGTGT CGCGTGCGCG TGCCGTTTGG CAAACAGCAG
GAGCGCATCG GGGTTGTGGT GTCAGTTAGC GACGTCAGCG AGCTGCCGCT CAACGAGCTG
AAAGTGGTAG TAGAAGTGCT GGACGTTGAG CCGGTATTTA CTCACTCCGT CTGGCGATTA
CTGCTATGGG CGGCAGATTA CTATCATCAT CCGATTGGCG ATGTGCTGTT TCATGCCTTG
CCGATTTTAC TGCGCCAGGG GCGGCCTGCG GCGAACGCGC CGATGTGGTA CTGGTTTGCC
ACTGAACAAG GTCAGGCGGT GGATCTGAAC AGCCTGAAAC GTTCGCCAAA GCAACAACAG
GCACTGGCAG CATTGCGACA AGGGAAAATC TGGCGCGATC AGGTCGCCAC GCTCGAATTT
AATGATGCTG CACTGCAGGC GCTGCGCAAA AAAGGTCTGT GTGATTTAGC AAGTGAAACA
CCAGAGTTTA GCGACTGGCG AAAGAATTAT GCCGTTTCTG GTGAGCGGTT GCGATTGAAT
ACCGAACAGG CCACCGCCGT TGGCGCAATT CATAGCGCGG CAGATACCTT CTCTGCCTGG
CTGCTGGCGG GCGTCACCGG TTCCGGTAAA ACAGAAGTTT ATTTGAGCGT ACTGGAAAAC
GTGCTCGCTC AGGGCAAGCA GGCGCTGGTG ATGGTGCCGG AAATCGGCCT GACGCCGCAA
ACTATCGCCC GTTTTCGTGA ACGTTTTAAT GCCCCCGTGG AAGTTCTGCA TTCCGGCCTG
AACGACAGCG AGCGCCTTTC GGCGTGGCTG AAAGCGAAAA ATGGCGAGGC GGCGATTGTG
ATTGGCACCC GCTCCGCGCT GTTTACGCCG TTTAAAAATC TCGGCGTGAT TGTCATTGAT
GAAGAGCACG ACAGCTCCTA CAAGCAGCAG GAAGGCTGGC GCTATCATGC CCGCGACCTG
GCGGTGTATC GTGCGCACAG CGAGCAAATC CCGATTATTC TTGGCTCCGC AACGCCCGCG
CTGGAAACGT TATGCAACGT CCAGCAGAAA AAATACCGCC TGCTGCGCCT GACCCGTCGG
GCGGGCAATG CGCGCCCGGC AATTCAACAT GTGCTGGATT TAAAAGGTCA GAAGGTGCAG
GCAGGTCTGG CTCCGGCGTT AATCACCCGT ATGCGCCAGC ATTTACAGGC CAACAATCAG
GTTATCCTCT TTCTTAACCG CCGGGGTTTT GCGCCTGCGC TACTGTGCCA CGACTGTGGC
TGGATAGCCG AATGCCCACG TTGCGATCAC TACTACACGC TGCATCAGGC GCAACAGCAT
TTGCGTTGCC ACCACTGTGA CAGTCAGCGT CCGGTGCCGC GCCAGTGCCC TTCTTGCGGT
TCCACGCACC TGGTCCCCGT GGGGCTGGGC ACCGAACAGC TTGAACAGAC GCTCGCACCG
TTGTTCCCTG GTGTGCCCAT TTCTCGTATC GACCGCGATA CCACCAGCCG TAAAGGTGCG
CTGGAACAAC AACTGGCGGA AGTACATCGC GGTGGCGCGA GGATTTTGAT CGGCACGCAA
ATGCTGGCGA AAGGTCACCA CTTTCCGGAT GTGACGCTGG TGGCGTTACT GGACGTAGAC
GGCGCGCTGT TTTCTGCCGA TTTTCGCTCG GCAGAGCGTT TCGCCCAGCT TTACACCCAG
GTCGCCGGTC GTGCCGGGCG TGCGGGTAAA CAGGGCGAAG TGGTGCTGCA AACGCACCAT
CCTGAACATC CGCTGTTGCA AACGTTGCTC TATAAAGGCT ACGACGCCTT TGCCGAACAG
GCACTGGCTG AACGACGCAT GATGCAGCTG CCGCCGTGGA CCAGCCATGT GATTGTGCGT
GCGGAAGATC ATAACAATCA GCACGCGCCG CTGTTCCTGC AACAACTGCG TAATCTCATC
CTCTCCAGCC CGCTGGCAGA CGACAAACTG TGGGTTCTCG GTCCGGTTCC GGCGCTGGCT
CCGAAACGTG GTGGTCGCTG GCGCTGGCAA ATTTTGTTGC AGCACCCTTC CCGCGTGCGC
TTACAGCACA TCATCAATGG TACGCTGGCA CTTATTAATA CAATACCGGA TTCCCGCAAG
GTGAAATGGG TACTGGATGT TGATCCGATT GAGGGTTAA
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| Protein sequence | MPVAHVALPV PLPRTFDYLL PEGMTVKAGC RVRVPFGKQQ ERIGVVVSVS DVSELPLNEL
KVVVEVLDVE PVFTHSVWRL LLWAADYYHH PIGDVLFHAL PILLRQGRPA ANAPMWYWFA
TEQGQAVDLN SLKRSPKQQQ ALAALRQGKI WRDQVATLEF NDAALQALRK KGLCDLASET
PEFSDWRKNY AVSGERLRLN TEQATAVGAI HSAADTFSAW LLAGVTGSGK TEVYLSVLEN
VLAQGKQALV MVPEIGLTPQ TIARFRERFN APVEVLHSGL NDSERLSAWL KAKNGEAAIV
IGTRSALFTP FKNLGVIVID EEHDSSYKQQ EGWRYHARDL AVYRAHSEQI PIILGSATPA
LETLCNVQQK KYRLLRLTRR AGNARPAIQH VLDLKGQKVQ AGLAPALITR MRQHLQANNQ
VILFLNRRGF APALLCHDCG WIAECPRCDH YYTLHQAQQH LRCHHCDSQR PVPRQCPSCG
STHLVPVGLG TEQLEQTLAP LFPGVPISRI DRDTTSRKGA LEQQLAEVHR GGARILIGTQ
MLAKGHHFPD VTLVALLDVD GALFSADFRS AERFAQLYTQ VAGRAGRAGK QGEVVLQTHH
PEHPLLQTLL YKGYDAFAEQ ALAERRMMQL PPWTSHVIVR AEDHNNQHAP LFLQQLRNLI
LSSPLADDKL WVLGPVPALA PKRGGRWRWQ ILLQHPSRVR LQHIINGTLA LINTIPDSRK
VKWVLDVDPI EG
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