Gene EcSMS35_4342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4342 
Symbol 
ID6142797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4433657 
End bp4434184 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content45% 
IMG OID641619163 
Producttail fiber assembly protein GpG 
Protein accessionYP_001746287 
Protein GI170680642 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.894245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.082245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCACT TAAAGAACAT AAAAGCGGGT AACGCTAAAA CACTGGAACA GTATGAGTTA 
ACAAAGAAAC ACGGAGTTAT CTGGCTTTAC TCTGAGGACG GAAAAAACTG GTATGAGGAA
GTGAAGAACT TTCAGCCAGA CACAATAAAG ATTGTTTACG ATGAAAATAA TATTATTGTC
GCTATCACCA GAGATGCTTC AACGCTTAAT CCTGAAGGTT TTAGCGTTGT TGAGGTTCCT
GATATTACCT CCAACCGACG TGCTGACGAC TCAGGTAAAT GGATGTTTAA GGATGGTGCC
GTGATTAAGC GGATTTATAC GGCAGACGAA CAGCAGAAAC TGGCGGAATT ACATAAGGCA
GCTTTGCTTT CCGAAGCTGA ATCCGTGATT TTGCCGCTGG AGCGCGCGGT CAGGCTGAAT
ATGGCAACAG ATGAGGAGCG TAGTCGACTG GAGGCATGGG AACGCTATAG TGTTCTGGTC
AGTCGTGTGG ATCCTGCAAA TCCTGAATGG CCGGAAATGC CGCAATAA
 
Protein sequence
MMHLKNIKAG NAKTLEQYEL TKKHGVIWLY SEDGKNWYEE VKNFQPDTIK IVYDENNIIV 
AITRDASTLN PEGFSVVEVP DITSNRRADD SGKWMFKDGA VIKRIYTADE QQKLAELHKA
ALLSEAESVI LPLERAVRLN MATDEERSRL EAWERYSVLV SRVDPANPEW PEMPQ