Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4305 |
Symbol | cpxR |
ID | 6142971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4407399 |
End bp | 4408097 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641619126 |
Product | DNA-binding transcriptional regulator CpxR |
Protein accession | YP_001746250 |
Protein GI | 170683339 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0517203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0145886 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAA TCCTGTTAGT TGATGATGAC CGAGAGCTGA CTTCCCTATT AAAGGAGCTG CTCGAGATGG AAGGCTTCAA CGTGATTGTT GCCCACGATG GGGAACAGGC GCTTGATCTT CTGGACGACA GCATTGATTT ACTTTTGCTT GATGTAATGA TGCCGAAGAA AAATGGTATC GACACATTAA AAGCACTTCG CCAGACACAC CAGACGCCTG TCATTATGTT GACGGCGCGC GGCAGTGAAC TTGATCGCGT TCTCGGCCTT GAGCTGGGCG CAGATGACTA TCTCCCGAAA CCGTTTAATG ATCGTGAGCT GGTGGCACGT ATTCGCGCGA TCCTGCGCCG TTCGCACTGG AGCGAGCAAC AGCAAAACAA CGACAACGGT TCACCGACAC TGGAAGTTGA TGCCTTAGTG CTGAATCCAG GCCGTCAGGA AGCCAGCTTC GACGGGCAAA CGCTGGAGTT AACCGGCACT GAGTTTACCC TGCTCTATTT GCTGGCACAG CATCTGGGTC AGGTGGTTTC CCGTGAGCAT TTAAGCCAGG AAGTGCTGGG CAAACGCCTG ACGCCTTTCG ACCGCGCTAT TGATATGCAC ATTTCCAACC TGCGTCGTAA ACTGCCGGAT CGTAAAGATG GTCATCCGTG GTTTAAAACC TTGCGTGGTC GCGGCTATCT GATGGTTTCT GCTTCATGA
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Protein sequence | MNKILLVDDD RELTSLLKEL LEMEGFNVIV AHDGEQALDL LDDSIDLLLL DVMMPKKNGI DTLKALRQTH QTPVIMLTAR GSELDRVLGL ELGADDYLPK PFNDRELVAR IRAILRRSHW SEQQQNNDNG SPTLEVDALV LNPGRQEASF DGQTLELTGT EFTLLYLLAQ HLGQVVSREH LSQEVLGKRL TPFDRAIDMH ISNLRRKLPD RKDGHPWFKT LRGRGYLMVS AS
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