Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4303 |
Symbol | |
ID | 6146513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4405250 |
End bp | 4405924 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641619124 |
Product | hypothetical protein |
Protein accession | YP_001746248 |
Protein GI | 170684189 |
COG category | [S] Function unknown |
COG ID | [COG2258] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.445001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.00595644 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGATATC CGGTTGATGT ATACACAGGC AAGATTCAGG CTTATCCCGA AGGCAAACCC AGCGCAATTG CCAAAATCCA GGTTGATGGT GAGTTGATGC TGACGGAGCT GGGGCTGGAA GGTGACGAGC AGGCGGAGAA AATGGTTCAC GGCGGGCCAG ACAGAGCGCT TTGTCATTAT CCTCGTGAGC ACTATCTCTA CTGGGCGCGG GAATTTCCGG AACAGGCGGA GTTGTTTGTT GCGCCTGCGT TTGGTGAAAA TCTCTCAACC GACGGTCTGA CGGAAAGTAA TGTTTATATG GGCGATATTT TCCGCTGGGG AGAGGCATTA ATTCAGGTCA GCCAGCCGCG CTCGCCTTGC TATAAACTCA ATTACCATTT TGATATCAGC GACATAGCGC AGTTGATGCA AAACACGGGT AAAGTGGGGT GGTTGTATAG CGTAATTGCA CCAGGGTTGG TATCTGCTGA TGCGCCACTG GAGTTGGTTT CCCGTGTCAG TGATGTGACC GTGCAGGAGG CTGCCGCCAT CGCATGGCAT ATGCCGTTTG ATGACGATCA GTATCACCGT TTACTCTCCG CCGCCGGGTT ATCGAAAAGC TGGACGCGGA CGATGCAAAA GCGCCGACTG AGCGGCAAGA TCGAAGATTT TTCCCGCCGG TTGTGGGGAA AATAA
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Protein sequence | MRYPVDVYTG KIQAYPEGKP SAIAKIQVDG ELMLTELGLE GDEQAEKMVH GGPDRALCHY PREHYLYWAR EFPEQAELFV APAFGENLST DGLTESNVYM GDIFRWGEAL IQVSQPRSPC YKLNYHFDIS DIAQLMQNTG KVGWLYSVIA PGLVSADAPL ELVSRVSDVT VQEAAAIAWH MPFDDDQYHR LLSAAGLSKS WTRTMQKRRL SGKIEDFSRR LWGK
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