Gene EcSMS35_4303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4303 
Symbol 
ID6146513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4405250 
End bp4405924 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content52% 
IMG OID641619124 
Producthypothetical protein 
Protein accessionYP_001746248 
Protein GI170684189 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.445001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00595644 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGATATC CGGTTGATGT ATACACAGGC AAGATTCAGG CTTATCCCGA AGGCAAACCC 
AGCGCAATTG CCAAAATCCA GGTTGATGGT GAGTTGATGC TGACGGAGCT GGGGCTGGAA
GGTGACGAGC AGGCGGAGAA AATGGTTCAC GGCGGGCCAG ACAGAGCGCT TTGTCATTAT
CCTCGTGAGC ACTATCTCTA CTGGGCGCGG GAATTTCCGG AACAGGCGGA GTTGTTTGTT
GCGCCTGCGT TTGGTGAAAA TCTCTCAACC GACGGTCTGA CGGAAAGTAA TGTTTATATG
GGCGATATTT TCCGCTGGGG AGAGGCATTA ATTCAGGTCA GCCAGCCGCG CTCGCCTTGC
TATAAACTCA ATTACCATTT TGATATCAGC GACATAGCGC AGTTGATGCA AAACACGGGT
AAAGTGGGGT GGTTGTATAG CGTAATTGCA CCAGGGTTGG TATCTGCTGA TGCGCCACTG
GAGTTGGTTT CCCGTGTCAG TGATGTGACC GTGCAGGAGG CTGCCGCCAT CGCATGGCAT
ATGCCGTTTG ATGACGATCA GTATCACCGT TTACTCTCCG CCGCCGGGTT ATCGAAAAGC
TGGACGCGGA CGATGCAAAA GCGCCGACTG AGCGGCAAGA TCGAAGATTT TTCCCGCCGG
TTGTGGGGAA AATAA
 
Protein sequence
MRYPVDVYTG KIQAYPEGKP SAIAKIQVDG ELMLTELGLE GDEQAEKMVH GGPDRALCHY 
PREHYLYWAR EFPEQAELFV APAFGENLST DGLTESNVYM GDIFRWGEAL IQVSQPRSPC
YKLNYHFDIS DIAQLMQNTG KVGWLYSVIA PGLVSADAPL ELVSRVSDVT VQEAAAIAWH
MPFDDDQYHR LLSAAGLSKS WTRTMQKRRL SGKIEDFSRR LWGK