Gene EcSMS35_4254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4254 
SymbolglnL 
ID6146202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4350034 
End bp4351083 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content55% 
IMG OID641619075 
Productnitrogen regulation protein NR(II) 
Protein accessionYP_001746199 
Protein GI170681876 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.388785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAG GCACGCAGCC CGATGCTGGG CAGATCCTCA ACTCGCTGAT TAACAGTATT 
TTGTTAATTG ATGACAATCT GGCGATCCAT TACGCCAACC CCGCCGCGCA ACAACTGCTC
GCCCAAAGCT CCCGCAAATT GTTTGGTACG CCGTTACCGG AACTGTTGAG CTACTTCTCA
TTAAATATCG AGCTGATGCA AGAAAGTCTG GAGGCGGGGC AAGGCTTTAC CGATAACGAA
GTGACGCTGG TCATCGACGG GCGCTCGCAT ATCCTTTCTG TGACGGCTCA GCGTATGCCG
GACGGCATGA TCCTGCTGGA GATGGCACCG ATGGATAACC AGCGCCGCTT AAGTCAGGAA
CAGCTACAGC ACGCCCAGCA GGTTGCTGCC CGTGATTTAG TGCGCGGCCT GGCACATGAG
ATTAAAAATC CGCTTGGCGG TTTACGTGGC GCGGCGCAGC TGCTCAGCAA AGCATTACCT
GACCCGTCAC TACTCGAATA TACCAAAGTG ATTATCGAAC AGGCGGACCG GCTGCGAAAT
CTGGTCGACC GTCTGTTGGG GCCGCAGCTG CCCGGTACGC GTATTACCGA AAGTATTCAC
AAAGTGGCTG AACGCGTGGT GACGCTGGTG TCGATGGAAC TGCCGAGCAA CGTGCGGTTG
ATTCGGGATT ACGACCCCAG CCTGCCGGAA CTGGCGCACG ACCCGGATCA AATTGAACAG
GTCTTGCTGA ATATTGTGCG CAATGCGCTA CAGGCGCTGG GGCCGGAGGG TGGTGAAATC
ATTCTGCGTA CCCGCACCGC GTTTCAACTG ACCTTACACG GCGAGCGTTA TCGGCTGGCG
GCGCGAATTG ATGTGGAAGA TAACGGGCCA GGTATTCCGC CTCATTTGCA GGATACGCTG
TTTTACCCGA TGGTCAGCGG CCGCGAAGGT GGCACCGGGC TTGGCTTATC CATCGCCCGT
AATTTGATTG ATCAGCATTC AGGCAAAATT GAATTTACCA GTTGGCCAGG TCATACCGAG
TTCTCGGTTT ACCTGCCTAT CAGGAAATAA
 
Protein sequence
MATGTQPDAG QILNSLINSI LLIDDNLAIH YANPAAQQLL AQSSRKLFGT PLPELLSYFS 
LNIELMQESL EAGQGFTDNE VTLVIDGRSH ILSVTAQRMP DGMILLEMAP MDNQRRLSQE
QLQHAQQVAA RDLVRGLAHE IKNPLGGLRG AAQLLSKALP DPSLLEYTKV IIEQADRLRN
LVDRLLGPQL PGTRITESIH KVAERVVTLV SMELPSNVRL IRDYDPSLPE LAHDPDQIEQ
VLLNIVRNAL QALGPEGGEI ILRTRTAFQL TLHGERYRLA ARIDVEDNGP GIPPHLQDTL
FYPMVSGREG GTGLGLSIAR NLIDQHSGKI EFTSWPGHTE FSVYLPIRK