| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4244 |
|---|
| Symbol | |
|---|
| ID | 6146290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4340452 |
|---|
| End bp | 4341408 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641619065 |
|---|
| Product | putative acyltransferase |
|---|
| Protein accession | YP_001746189 |
|---|
| Protein GI | 170679865 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00468249 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.164529 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGCTTCT TTAGCGCACT GTCTATGGCT AACCTTTTGA ATAAATTCAT TATGACGAGA
ATACTCGCTG CGATAACCCT TTTGCTGAGT ATCGTATTGA CCATTTTGGT CACTATTTTT
TGTTCCGTCC CGATCATCAT TGCCGGGATT GTAAAACTAT TGCTACCTGT GCCAGTCATT
TGGCGAAAGG TTTCGCGTTT TTGTGATTTT ATGATGTATT GCTGGTGTGA AGGTCTGGCG
GTATTACTGC ATCTGAACCC ACACCTGCAA TGGGAAGTTC ACGGGCTGGA AGGGTTAAGT
AAGAAGAACT GGTATCTGCT TATTTGTAAC CACCGTAGTT GGGCAGATAT TGTCGTACTG
TGCGTGCTGT TTCGTAAGCA CATTCCGATG AATAAATATT TCCTCAAGCA ACAGCTGGCC
TGGGTGCCAT TTCTTGGCCT GGCGTGCTGG GCGCTGGATA TGCCGTTTAT GAAGCGTTAT
TCCCGCGCTT ATTTATTACG TCATCCGGAG CGACGTGGTA AAGATGTTGA AACCACTCGG
CGTTCTTGTG AAAAGTTTCG CCTGCATCCC ACCACCATTG TCAATTTCGT TGAAGGCTCC
CGTTTCACGC AAGAAAAACA TCAGCAAACC CACTCCACTT TTCAAAACTT GTTGCCACCA
AAGGCGGCAG GCATTGCGAT GGCGCTAAAT GTACTGGGTA AACAATTCGA TAAACTGCTT
AATGTTACGC TGTGTTATCC GGACAATAAC CGTCAGCCGT TCTTCGATAT GTTAAGCGGT
AAACTGACGC GAATTGTCGT ACATGTGGAT TTGCAGCCTA TTTCCGATGA GTTACATGGC
GACTACATCA ATGACAAAAG CTTTAAGCGC CATTTTCAGC AATGGCTGAA CTCACTGTGG
CAGGAAAAAG ACCGGCTTCT GACGTCGTTG ATGTCATCAC AGCGGCAGGA CAAGTAA
|
|---|
| Protein sequence | MRFFSALSMA NLLNKFIMTR ILAAITLLLS IVLTILVTIF CSVPIIIAGI VKLLLPVPVI
WRKVSRFCDF MMYCWCEGLA VLLHLNPHLQ WEVHGLEGLS KKNWYLLICN HRSWADIVVL
CVLFRKHIPM NKYFLKQQLA WVPFLGLACW ALDMPFMKRY SRAYLLRHPE RRGKDVETTR
RSCEKFRLHP TTIVNFVEGS RFTQEKHQQT HSTFQNLLPP KAAGIAMALN VLGKQFDKLL
NVTLCYPDNN RQPFFDMLSG KLTRIVVHVD LQPISDELHG DYINDKSFKR HFQQWLNSLW
QEKDRLLTSL MSSQRQDK
|
|---|
| |