Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4215 |
Symbol | rmuC |
ID | 6147404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4312569 |
End bp | 4313996 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641619038 |
Product | DNA recombination protein RmuC |
Protein accession | YP_001746166 |
Protein GI | 170682711 |
COG category | [S] Function unknown |
COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.00178154 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGATTTCT CAATCATGGT TTACGCAGTT ATTGCATTGG TGGGTGTGGC AATTGGCTGG CTGTTTGCCA GTTATCAACA TGCGCAGCAA AAAGCCGAGC AATTAGCTGA ACGTGAAGAG ATGGTCGCGG AGTTAAGCGC GGCAAAACAA CAAATTACTC AAAGCGAGCA CTGGCGCGCT GAGTGCGAGT TACTCAATAA CGAAGTGCGC AGCCTGCAAA GTATTAACAC CTCTCTGGAG GCCGATCTGC GTGAAGTAAC CACGCGGATG GAAGCTGCAC AGCAACATGC TGACGATAAA ATTCGCCAGA TGATTAACAG CGAGCAGCGC CTCAGTGAGC AGTTTGAAAA CCTCGCCAAC CGTATTTTTG AGCACAGCAA TCGCCGGGTT GATGAGCAAA ACCGTCAGAG CCTGAACAGC CTGTTGTCGC CGCTACGTGA ACAACTGGAC GGTTTCCGCC GTCAGGTCCA GGACAGCTTT GGTAAAGAAG CCCAAGAACG TCATACCCTG ACTCACGAAA TCCGCAACCT CCAGCAACTC AACGCCCAGA TGGCCCAGGA AGCGATCAAC CTGACGCGTG CGCTGAAAGG CGACAATAAA ACCCAGGGCA ACTGGGGCGA GGTAGTATTG ACGCGGGTGC TGGAGGCTTC CGGTCTGCGT GAAGGGTATG AATATGAAAC CCAGGTCAGC ATCGAAAATG ACGCCCGCTC GCGGATGCAG CCGGATGTCA TCGTGCGGTT GCCGCAGGGA AAAGATGTGG TGATCGACGC CAAAATGACG CTGGTCGCCT ATGAACGCTA TTTCAACGCC GAAGATGACT ACACCCGCGA AAGCGCGCTA CAGGAACATA TCGCGTCGGT GCGTAACCAT ATCCGTTTGC TGGGACGCAA AGATTATCAA CAGCTGCCGG GGCTGCGAAC CCTGGATTAC GTTCTGATGT TTATTCCCGT TGAACCCGCT TTTTTACTGG CGCTTGACCG CCAGCCGGAG CTGATCACCG AAGCGTTGAA AAACAATATC ATGCTGGTTA GCCCGACTAC GCTGCTGGTG GCGCTGCGCA CTATCGCCAA CCTGTGGCGT TATGAGCATC AAAGCCGCAA CGCCCAGCAA ATCGCCGATC GTGCCAGCAA GCTGTACGAC AAGATGCGTT TGTTCGTCGA TGACATGTCA GCGATTGGTC AAAGTCTCGA CAAAGCGCAG GATAACTACC GCCAGGCAAT GAAAAAACTC TCTTCAGGTC GCGGAAATGT GCTGGCGCAG GCAGAAGCGT TTCGCGGTTT AGGGGTAGAA ATTAAACGCG AGATTAATCC GGATTTGGCT GAACAAGCGG TGAGCCAGGA TGAAGAGTAT CGACTGCGGT CGGTTCCGGA GCAGCCGAAT GATGAAGCTT ATCAACGCGA TGATGAATAT AATCAGCAGT CGCGCTAG
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Protein sequence | MDFSIMVYAV IALVGVAIGW LFASYQHAQQ KAEQLAEREE MVAELSAAKQ QITQSEHWRA ECELLNNEVR SLQSINTSLE ADLREVTTRM EAAQQHADDK IRQMINSEQR LSEQFENLAN RIFEHSNRRV DEQNRQSLNS LLSPLREQLD GFRRQVQDSF GKEAQERHTL THEIRNLQQL NAQMAQEAIN LTRALKGDNK TQGNWGEVVL TRVLEASGLR EGYEYETQVS IENDARSRMQ PDVIVRLPQG KDVVIDAKMT LVAYERYFNA EDDYTRESAL QEHIASVRNH IRLLGRKDYQ QLPGLRTLDY VLMFIPVEPA FLLALDRQPE LITEALKNNI MLVSPTTLLV ALRTIANLWR YEHQSRNAQQ IADRASKLYD KMRLFVDDMS AIGQSLDKAQ DNYRQAMKKL SSGRGNVLAQ AEAFRGLGVE IKREINPDLA EQAVSQDEEY RLRSVPEQPN DEAYQRDDEY NQQSR
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