Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4214 |
Symbol | |
ID | 6143009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4311585 |
End bp | 4312439 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641619037 |
Product | IclR family transcriptional regulator |
Protein accession | YP_001746165 |
Protein GI | 170683184 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00389286 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGATGGA GTTTATATTG TGGGATATAT CACCTTTTCC CCACGTCATT ATGTGGAACA CTTCAGCAAT ATCATCAGGA GAAACGTATG GCAGAAACCT CTTCAACCAC CGCAGGCGCA CAAACGTTAT TACGTGGACT GGCGGTTCTT AATGCTGTTT ATAACGGCTG CCATGACCTA AAAAGTATCG GCGAGTTCAC CGGCACGACC CGGAGCACAA CCCATCGTTT AGTCACCGTT CTGGTGGAAC AACGCTACCT GCGCCATGTC CCAACGCAGG GCTACCAACT GGGTGCCAAA CTGATCGAAT TCGGTGCCAG AGCACTGGAA AGCACCTCGC TGTACGAAAT TGCCCAGCCC GTTTTGCAAC GCCTTGCCCG TTACACCCTG GACACCGTGC ATCTGGGGAT CGTTGAAGGC GACGAAGTGC TGTATCTGGA GAAGATCAAC AGTCAGCGCG GGCTGGAAAT GCGCTCACGC CCAGGCCATC GCATGCCACT GGCAATCACC GGCATCGGCA AAGCATTGAT ACTCAACCGA ACAGAAGAAG AGTGGCGCAC GCTGTTTAAG ACCTGTGGTG ATGAAACAAA ACTGGGCGCA TTTATTCAGA ACATGCGTCG TTATGCCGCC AGTGGTTTTG CTTTTGATCT GGAAGAGAAC GAGCCGACTA TCCGTTGCGT TGCAGCGCCG GTTTACAACG CCCGGGATGA AATTGTGGCG GCTATTTCTG TCGCCAGTAC CACCACGTAT ATGTCGCTGG CGCGTCTGGA AGAACTGGCA CCTTACGTCA AATCCTGTGC AGAAGAGATA TCCGCTGAAC TGGGCTGGGG TAAGCACGTC CGCAAAGATA AATAA
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Protein sequence | MRWSLYCGIY HLFPTSLCGT LQQYHQEKRM AETSSTTAGA QTLLRGLAVL NAVYNGCHDL KSIGEFTGTT RSTTHRLVTV LVEQRYLRHV PTQGYQLGAK LIEFGARALE STSLYEIAQP VLQRLARYTL DTVHLGIVEG DEVLYLEKIN SQRGLEMRSR PGHRMPLAIT GIGKALILNR TEEEWRTLFK TCGDETKLGA FIQNMRRYAA SGFAFDLEEN EPTIRCVAAP VYNARDEIVA AISVASTTTY MSLARLEELA PYVKSCAEEI SAELGWGKHV RKDK
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